Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC010342.1-201ENST00000514047 877 ntBASIC4.91□□□□□ -1.62
RGPD3A6NKT7 RN7SKP46-201ENST00000515942 234 ntBASIC4.91□□□□□ -1.62
RGPD3A6NKT7 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.91□□□□□ -1.62
RGPD3A6NKT7 AC006960.3-201ENST00000561845 705 ntBASIC4.91□□□□□ -1.62
RGPD3A6NKT7 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.91□□□□□ -1.62
RGPD3A6NKT7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.91□□□□□ -1.62
RGPD3A6NKT7 YES1-203ENST00000577961 4554 ntTSL 5 BASIC4.91□□□□□ -1.62
RGPD3A6NKT7 AL672167.1-203ENST00000641299 2975 ntBASIC4.91□□□□□ -1.62
RGPD3A6NKT7 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RGPD3A6NKT7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RGPD3A6NKT7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RGPD3A6NKT7 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RGPD3A6NKT7 SNORD35B-201ENST00000363660 87 ntBASIC4.91□□□□□ -1.62
RGPD3A6NKT7 RNA5SP50-201ENST00000363731 107 ntBASIC4.91□□□□□ -1.62
RGPD3A6NKT7 RNU6-316P-201ENST00000391027 107 ntBASIC4.91□□□□□ -1.62
RGPD3A6NKT7 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RGPD3A6NKT7 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.91□□□□□ -1.62
RGPD3A6NKT7 RPL12P46-201ENST00000436610 195 ntBASIC4.91□□□□□ -1.62
RGPD3A6NKT7 AC127537.2-201ENST00000439258 465 ntBASIC4.91□□□□□ -1.62
RGPD3A6NKT7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.91□□□□□ -1.62
RGPD3A6NKT7 RPL23AP12-201ENST00000467573 473 ntBASIC4.91□□□□□ -1.62
RGPD3A6NKT7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RGPD3A6NKT7 RANP9-201ENST00000519957 271 ntBASIC4.91□□□□□ -1.62
RGPD3A6NKT7 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.91□□□□□ -1.62
RGPD3A6NKT7 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.91□□□□□ -1.62
RGPD3A6NKT7 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.91□□□□□ -1.62
RGPD3A6NKT7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.91□□□□□ -1.62
RGPD3A6NKT7 AC119674.1-207ENST00000641355 633 ntBASIC4.91□□□□□ -1.62
RGPD3A6NKT7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RGPD3A6NKT7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.9□□□□□ -1.62
RGPD3A6NKT7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.9□□□□□ -1.62
RGPD3A6NKT7 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
RGPD3A6NKT7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
RGPD3A6NKT7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.9□□□□□ -1.63
RGPD3A6NKT7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RGPD3A6NKT7 MIR1251-201ENST00000408552 70 ntBASIC4.9□□□□□ -1.63
RGPD3A6NKT7 PGBD4P8-201ENST00000412993 562 ntBASIC4.9□□□□□ -1.63
RGPD3A6NKT7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.9□□□□□ -1.63
RGPD3A6NKT7 UBDP1-202ENST00000457888 382 ntBASIC4.9□□□□□ -1.63
RGPD3A6NKT7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.9□□□□□ -1.63
RGPD3A6NKT7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
RGPD3A6NKT7 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RGPD3A6NKT7 AC108022.1-201ENST00000493466 478 ntBASIC4.9□□□□□ -1.63
RGPD3A6NKT7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.9□□□□□ -1.63
RGPD3A6NKT7 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.9□□□□□ -1.63
RGPD3A6NKT7 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.9□□□□□ -1.63
RGPD3A6NKT7 MTND1P6-201ENST00000523621 946 ntBASIC4.9□□□□□ -1.63
RGPD3A6NKT7 CYCSP28-201ENST00000534284 321 ntBASIC4.9□□□□□ -1.63
RGPD3A6NKT7 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.9□□□□□ -1.63
RGPD3A6NKT7 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RGPD3A6NKT7 RPL23AP87-202ENST00000573039 466 ntBASIC4.9□□□□□ -1.63
RGPD3A6NKT7 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.9□□□□□ -1.63
RGPD3A6NKT7 MTCO3P22-201ENST00000603219 784 ntBASIC4.9□□□□□ -1.63
RGPD3A6NKT7 AC064801.1-201ENST00000612025 407 ntBASIC4.9□□□□□ -1.63
RGPD3A6NKT7 AC090246.1-201ENST00000616499 426 ntBASIC4.9□□□□□ -1.63
RGPD3A6NKT7 AC005086.4-201ENST00000623065 213 ntBASIC4.9□□□□□ -1.63
RGPD3A6NKT7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RGPD3A6NKT7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
RGPD3A6NKT7 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC4.9□□□□□ -1.63
RGPD3A6NKT7 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RGPD3A6NKT7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 OR10J6P-201ENST00000289731 930 ntBASIC4.89□□□□□ -1.63
RGPD3A6NKT7 SNORD9-201ENST00000362566 104 ntBASIC4.89□□□□□ -1.63
RGPD3A6NKT7 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 SOD2P1-201ENST00000396543 562 ntBASIC4.89□□□□□ -1.63
RGPD3A6NKT7 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 ATP5JP1-201ENST00000431631 322 ntBASIC4.89□□□□□ -1.63
RGPD3A6NKT7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 RPL21P11-201ENST00000461458 483 ntBASIC4.89□□□□□ -1.63
RGPD3A6NKT7 APOOP2-201ENST00000461561 539 ntBASIC4.89□□□□□ -1.63
RGPD3A6NKT7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 AL354760.1-201ENST00000608357 643 ntBASIC4.89□□□□□ -1.63
RGPD3A6NKT7 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 AC124312.6-202ENST00000623624 418 ntBASIC4.89□□□□□ -1.63
RGPD3A6NKT7 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RGPD3A6NKT7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 AL603766.1-201ENST00000407763 664 ntBASIC4.88□□□□□ -1.63
RGPD3A6NKT7 AL121878.1-201ENST00000418638 859 ntBASIC4.88□□□□□ -1.63
RGPD3A6NKT7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 AC004448.2-201ENST00000422360 586 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms