Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 EXTL2P1-201ENST00000446218 416 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 RPS4XP12-201ENST00000461747 709 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 PRDX3P4-201ENST00000470828 747 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AC091951.3-201ENST00000504093 246 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 GAPDHP56-201ENST00000506031 988 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AC118282.2-201ENST00000508739 374 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 SNORA3.4-201ENST00000515969 96 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AC008033.2-201ENST00000542626 177 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AC044913.1-201ENST00000557200 430 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 MIR3912-201ENST00000577566 105 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AC013444.2-201ENST00000603317 787 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AL445222.1-201ENST00000607259 628 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AC016717.3-201ENST00000624730 554 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 AC017037.3-201ENST00000625016 472 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 MIR1322-201ENST00000638013 71 ntBASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV7S3A2A0A539 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AC046144.1-201ENST00000478559 1853 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AL442639.1-201ENST00000625030 1899 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 RNA5SP191-201ENST00000362585 102 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AC114814.2-201ENST00000419195 485 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 GTF2IP7-202ENST00000436677 309 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 CBX1P4-201ENST00000439415 457 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AC092809.1-201ENST00000441469 474 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 RPS7P5-201ENST00000441482 581 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 GAPDHP39-201ENST00000481866 979 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 RN7SL808P-201ENST00000496066 299 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AC098799.3-201ENST00000506095 438 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AC020937.1-201ENST00000519677 1013 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AC091515.1-201ENST00000548110 679 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AC105129.1-201ENST00000560250 297 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 NIFKP8-201ENST00000560500 874 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AC090312.2-201ENST00000582687 378 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AC124856.1-201ENST00000600819 896 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AP005137.2-201ENST00000609238 400 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 TUSC7.1-201ENST00000610969 165 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AC023509.5-201ENST00000617434 807 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AP002799.1-201ENST00000623552 423 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AP000550.3-201ENST00000637734 379 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AL355852.1-201ENST00000454081 1771 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms