Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 YPEL5P3-201ENST00000547227 352 ntBASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 CD24P2-201ENST00000565486 219 ntBASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 AC005255.1-201ENST00000593748 216 ntBASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 AC091167.4-201ENST00000605079 184 ntBASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 AL135786.2-201ENST00000608422 615 ntBASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 RMST_5.1-201ENST00000618704 126 ntBASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 AC104820.1-201ENST00000624183 307 ntBASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMIM28A0A1B0GU29 AP001273.1-201ENST00000624493 3152 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 NPM1P10-201ENST00000398310 865 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 RN7SKP202-201ENST00000410439 330 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 RN7SKP159-201ENST00000410657 292 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 RPL31P20-201ENST00000449593 360 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 NPM1P39-201ENST00000449818 867 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 AC091959.2-201ENST00000477363 321 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 RN7SL271P-201ENST00000487601 295 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 AC020593.1-201ENST00000507399 299 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 AC067904.2-201ENST00000517322 1283 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 NDUFA5P2-201ENST00000519723 344 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 AC092868.3-201ENST00000560515 784 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 HSPE1P5-201ENST00000561489 272 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 AC022968.1-201ENST00000567372 442 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 MTND6P33-201ENST00000571794 183 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 MTND2P13-201ENST00000577438 1039 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 MIR1254-2-201ENST00000579553 63 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 AC124856.1-201ENST00000600819 896 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 AL137072.1-201ENST00000603444 466 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 AL451086.1-201ENST00000605596 223 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 AC073111.2-201ENST00000605657 1075 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 AL354798.1-201ENST00000622505 329 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 AC055839.1-201ENST00000634467 498 ntBASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.3□□□□□ -1.72
SMIM28A0A1B0GU29 OR51C1P-202ENST00000641159 1444 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 RN7SKP27-201ENST00000410684 333 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 HMGB3P5-201ENST00000428894 612 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 TRIM60P13-201ENST00000432350 1283 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 OR9M1P-201ENST00000459641 921 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 GAPDHP36-201ENST00000480688 918 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 LARP7P4-201ENST00000481075 878 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 RPS3AP6-201ENST00000484430 795 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 AC146944.2-203ENST00000502493 354 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 AC017037.1-201ENST00000508460 471 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 AC006499.6-201ENST00000511169 607 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 SAP18P1-201ENST00000512058 390 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 AC139495.1-202ENST00000513164 354 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 AL390334.1-201ENST00000556395 450 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 MIR5685-201ENST00000579080 79 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 SNX6P1-201ENST00000601728 1224 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 AC104662.1-201ENST00000604448 511 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 AC090912.3-201ENST00000609775 533 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 AL645927.2-201ENST00000618350 349 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 AC095038.2-201ENST00000621464 1070 ntBASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms