Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC138907.10-201ENST00000623708 983 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 RPS4XP5-202ENST00000449995 1334 ntBASIC3.13□□□□□ -1.91
HLA-DRB4X5D2U9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 HSPA8P1-201ENST00000425843 1833 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 CUL4AP1-201ENST00000514750 1863 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 RNU1-32P-201ENST00000363937 159 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 SNORA62.2-201ENST00000364672 152 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 RNA5SP366-201ENST00000365454 123 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 RPL18P10-201ENST00000425606 538 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 RPL36AP13-201ENST00000457490 317 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 RPL21P71-201ENST00000465598 459 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 STRADBP1-201ENST00000478954 1281 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AC020593.1-201ENST00000507399 299 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AC005798.1-201ENST00000513715 387 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 RAB9BP1-201ENST00000519581 626 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AC105233.3-201ENST00000531125 744 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 VN1R79P-201ENST00000593540 513 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AC008745.1-201ENST00000604064 271 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 U7.8-201ENST00000619968 63 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 MIR7641-1-201ENST00000627518 61 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 Z82217.1-201ENST00000625157 8149 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AC009313.2-201ENST00000417893 1941 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AC022893.2-201ENST00000564832 3296 ntBASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DRB4X5D2U9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 AC092079.1-201ENST00000558620 1985 ntBASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 RNU1-132P-201ENST00000364300 164 ntBASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 OR13C3-201ENST00000374781 1108 ntBASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 U3.22-201ENST00000391120 215 ntBASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 RN7SKP182-201ENST00000410772 298 ntBASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 RPL23AP26-201ENST00000412728 464 ntBASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 NRBF2P2-201ENST00000413087 861 ntBASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 RPL7P53-201ENST00000421245 739 ntBASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 AL592293.2-201ENST00000422292 996 ntBASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 AC011742.1-201ENST00000431448 434 ntBASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 BTF3P10-201ENST00000433415 495 ntBASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 AC009263.1-201ENST00000441193 1239 ntBASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 RPL7P31-201ENST00000450192 724 ntBASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 PPIAP21-201ENST00000464473 501 ntBASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 UQCRHP4-201ENST00000471686 272 ntBASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 AC034205.1-201ENST00000520621 638 ntBASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DRB4X5D2U9 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms