Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MIR6736-201ENST00000616799 59 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AL136531.3-201ENST00000624378 3658 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA11Q9Y5H2 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 ASNSP3-201ENST00000451989 1306 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC02019-201ENST00000608605 2060 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 Z97989.1-201ENST00000531702 2421 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 RNU4-48P-201ENST00000365559 182 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AL391419.1-201ENST00000398901 1275 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 DSTNP4-201ENST00000399472 474 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AL096800.1-201ENST00000405326 893 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 OR1AA1P-201ENST00000419597 916 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 HSPE1P1-201ENST00000421494 318 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AC093156.1-201ENST00000440382 670 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AC114495.1-201ENST00000441274 436 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 RN7SL492P-201ENST00000460700 295 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AL163540.1-201ENST00000485382 386 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 PPP1R11P1-201ENST00000486095 376 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 RPL29P23-201ENST00000486188 442 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 MTCO1P29-201ENST00000496868 288 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 RPL7L1P7-201ENST00000509986 724 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 RNU6-559P-201ENST00000516151 98 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 SCARNA24.1-201ENST00000516465 137 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 OR5BN1P-201ENST00000532955 829 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AC068831.4-201ENST00000556118 109 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AC053481.3-201ENST00000577881 843 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AC068790.3-201ENST00000602988 553 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AC004908.2-201ENST00000609090 574 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AL445647.2-201ENST00000615170 130 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 AC007347.2-201ENST00000623044 180 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 PWAR1-201ENST00000624188 2414 ntBASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA11Q9Y5H2 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 Y_RNA.615-201ENST00000410769 117 ntBASIC6.55□□□□□ -1.36
PCDHGA11Q9Y5H2 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms