Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC3.9□□□□□ -1.79
CHD7Q9P2D1 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CHD7Q9P2D1 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.9□□□□□ -1.79
CHD7Q9P2D1 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CHD7Q9P2D1 AL669831.5-218ENST00000591702 1873 ntBASIC3.9□□□□□ -1.79
CHD7Q9P2D1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CHD7Q9P2D1 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC3.9□□□□□ -1.79
CHD7Q9P2D1 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.9□□□□□ -1.79
CHD7Q9P2D1 AC080014.1-201ENST00000496877 1201 ntBASIC3.9□□□□□ -1.79
CHD7Q9P2D1 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC3.9□□□□□ -1.79
CHD7Q9P2D1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.9□□□□□ -1.79
CHD7Q9P2D1 AL606834.2-201ENST00000602954 668 ntBASIC3.9□□□□□ -1.79
CHD7Q9P2D1 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CHD7Q9P2D1 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 Z95114.1-201ENST00000624264 14574 ntBASIC3.89□□□□□ -1.79
CHD7Q9P2D1 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 RPL36AP10-201ENST00000421785 322 ntBASIC3.89□□□□□ -1.79
CHD7Q9P2D1 HMGB1P21-201ENST00000502313 581 ntBASIC3.89□□□□□ -1.79
CHD7Q9P2D1 RNU2-27P-201ENST00000516185 142 ntBASIC3.89□□□□□ -1.79
CHD7Q9P2D1 SNORA70.18-201ENST00000516696 98 ntBASIC3.89□□□□□ -1.79
CHD7Q9P2D1 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 MIR7702-201ENST00000621931 59 ntBASIC3.89□□□□□ -1.79
CHD7Q9P2D1 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 RNA5SP50-201ENST00000363731 107 ntBASIC3.89□□□□□ -1.79
CHD7Q9P2D1 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 SNORA71B-202ENST00000439232 272 ntBASIC3.89□□□□□ -1.79
CHD7Q9P2D1 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 SNORA70.17-201ENST00000516449 133 ntBASIC3.89□□□□□ -1.79
CHD7Q9P2D1 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 AC015922.4-201ENST00000612568 690 ntBASIC3.89□□□□□ -1.79
CHD7Q9P2D1 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
CHD7Q9P2D1 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 SNORA80A-201ENST00000363922 136 ntBASIC3.88□□□□□ -1.79
CHD7Q9P2D1 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.88□□□□□ -1.79
CHD7Q9P2D1 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 AC008694.2-201ENST00000517591 306 ntBASIC3.88□□□□□ -1.79
CHD7Q9P2D1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 AC090286.3-201ENST00000573133 187 ntBASIC3.88□□□□□ -1.79
CHD7Q9P2D1 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 AC105074.1-201ENST00000623380 3095 ntBASIC3.88□□□□□ -1.79
CHD7Q9P2D1 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 AC234772.1-201ENST00000377927 937 ntBASIC3.88□□□□□ -1.79
CHD7Q9P2D1 AC096644.3-201ENST00000416788 338 ntBASIC3.88□□□□□ -1.79
CHD7Q9P2D1 HIGD1AP4-201ENST00000430194 280 ntBASIC3.88□□□□□ -1.79
CHD7Q9P2D1 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 AL354760.1-201ENST00000608357 643 ntBASIC3.88□□□□□ -1.79
CHD7Q9P2D1 AL354976.1-201ENST00000613843 387 ntBASIC3.88□□□□□ -1.79
CHD7Q9P2D1 AC095038.2-201ENST00000621464 1070 ntBASIC3.88□□□□□ -1.79
CHD7Q9P2D1 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CHD7Q9P2D1 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CHD7Q9P2D1 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.87□□□□□ -1.79
CHD7Q9P2D1 NPM1P25-201ENST00000429734 854 ntBASIC3.87□□□□□ -1.79
CHD7Q9P2D1 AC091862.1-201ENST00000438016 1100 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms