Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VTA1Q9NP79 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 AC006210.2-201ENST00000367074 1545 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 HSPA8P17-201ENST00000427029 1382 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VTA1Q9NP79 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VTA1Q9NP79 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.78□□□□□ -1.48
VTA1Q9NP79 SCARNA15-201ENST00000607520 4325 ntBASIC5.78□□□□□ -1.48
VTA1Q9NP79 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
VTA1Q9NP79 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.48
VTA1Q9NP79 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VTA1Q9NP79 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VTA1Q9NP79 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VTA1Q9NP79 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VTA1Q9NP79 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
VTA1Q9NP79 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VTA1Q9NP79 RN7SKP113-201ENST00000363891 295 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VTA1Q9NP79 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 RNU2-6P-201ENST00000411404 190 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 SETP15-201ENST00000412724 337 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 AL590139.1-201ENST00000416267 400 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 PTP4A1P5-201ENST00000420305 455 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 USP9YP26-201ENST00000421008 661 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 AC245028.1-201ENST00000423259 256 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 RPL7P44-201ENST00000424827 742 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 AC007559.1-201ENST00000428736 355 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 HSPD1P12-201ENST00000429127 1069 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 ARL4AP3-201ENST00000441452 574 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 OR7E125P-201ENST00000443450 846 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 AC112498.1-201ENST00000444401 332 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 CBX1P2-201ENST00000453841 458 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 AC015724.1-201ENST00000478577 156 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 AC104090.1-201ENST00000506341 1171 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 RNU6-1225P-201ENST00000516336 65 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 ISCA1P3-201ENST00000577104 373 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 MIR4999-201ENST00000585029 91 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 uc_338.18-201ENST00000615451 175 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VTA1Q9NP79 SDAD1P1-202ENST00000524156 2051 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VTA1Q9NP79 AL445523.1-201ENST00000451184 1362 ntBASIC5.77□□□□□ -1.49
VTA1Q9NP79 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
VTA1Q9NP79 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VTA1Q9NP79 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.77□□□□□ -1.49
VTA1Q9NP79 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VTA1Q9NP79 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
VTA1Q9NP79 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VTA1Q9NP79 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VTA1Q9NP79 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VTA1Q9NP79 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VTA1Q9NP79 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VTA1Q9NP79 AC120338.1-201ENST00000625074 1541 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 SNORA5.1-201ENST00000384275 131 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 MIR217-201ENST00000384817 110 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 MIR192-201ENST00000384915 110 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 AC136624.1-201ENST00000400791 413 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 RNU2-65P-201ENST00000410162 185 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 RNA5SP80-201ENST00000410475 111 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 FAR2P2-201ENST00000413041 594 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 AL450992.3-201ENST00000413192 568 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.76□□□□□ -1.49
VTA1Q9NP79 AC019050.1-201ENST00000418508 492 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 AC004074.1-201ENST00000421810 1063 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 FAR2P4-202ENST00000425399 584 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 Z93242.1-201ENST00000427102 353 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VTA1Q9NP79 AC016772.1-201ENST00000444170 1261 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 AL137845.2-201ENST00000444292 988 ntBASIC5.76□□□□□ -1.49
VTA1Q9NP79 MTCYBP3-201ENST00000445588 1137 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms