Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC099336.2-201ENST00000422457 254 ntBASIC3.73□□□□□ -1.81
HMG20AQ9NP66 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.73□□□□□ -1.81
HMG20AQ9NP66 RPL12P46-201ENST00000436610 195 ntBASIC3.73□□□□□ -1.81
HMG20AQ9NP66 AC114495.1-201ENST00000441274 436 ntBASIC3.73□□□□□ -1.81
HMG20AQ9NP66 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.73□□□□□ -1.81
HMG20AQ9NP66 AC022431.1-201ENST00000450941 438 ntBASIC3.73□□□□□ -1.81
HMG20AQ9NP66 DNAJC19P1-201ENST00000455312 319 ntBASIC3.73□□□□□ -1.81
HMG20AQ9NP66 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.73□□□□□ -1.81
HMG20AQ9NP66 AC099560.2-201ENST00000457554 255 ntBASIC3.73□□□□□ -1.81
HMG20AQ9NP66 RN7SL812P-201ENST00000493791 279 ntBASIC3.73□□□□□ -1.81
HMG20AQ9NP66 SEC11B-201ENST00000518383 499 ntBASIC3.73□□□□□ -1.81
HMG20AQ9NP66 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HMG20AQ9NP66 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.73□□□□□ -1.81
HMG20AQ9NP66 AC006064.5-201ENST00000541782 248 ntBASIC3.73□□□□□ -1.81
HMG20AQ9NP66 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.73□□□□□ -1.81
HMG20AQ9NP66 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.73□□□□□ -1.81
HMG20AQ9NP66 AC099489.2-201ENST00000574976 260 ntBASIC3.73□□□□□ -1.81
HMG20AQ9NP66 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.73□□□□□ -1.81
HMG20AQ9NP66 MIR4480-201ENST00000582492 71 ntBASIC3.73□□□□□ -1.81
HMG20AQ9NP66 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.73□□□□□ -1.81
HMG20AQ9NP66 AC090953.1-201ENST00000604305 1092 ntBASIC3.73□□□□□ -1.81
HMG20AQ9NP66 AC100847.1-201ENST00000611316 481 ntBASIC3.73□□□□□ -1.81
HMG20AQ9NP66 AL049539.1-201ENST00000611964 459 ntBASIC3.73□□□□□ -1.81
HMG20AQ9NP66 AC021106.3-201ENST00000623925 531 ntBASIC3.73□□□□□ -1.81
HMG20AQ9NP66 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.73□□□□□ -1.81
HMG20AQ9NP66 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.73□□□□□ -1.81
HMG20AQ9NP66 FP325313.1-201ENST00000638228 703 ntBASIC3.73□□□□□ -1.81
HMG20AQ9NP66 AC006504.1-201ENST00000562493 3666 ntBASIC3.73□□□□□ -1.81
HMG20AQ9NP66 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.73□□□□□ -1.81
HMG20AQ9NP66 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HMG20AQ9NP66 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
HMG20AQ9NP66 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.73□□□□□ -1.81
HMG20AQ9NP66 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HMG20AQ9NP66 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
HMG20AQ9NP66 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 CR381670.1-201ENST00000624291 1693 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 MIR3065-201ENST00000390137 79 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 ATP5F1P4-201ENST00000397288 746 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 RNU2-50P-201ENST00000410494 143 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 AJ239321.1-201ENST00000424255 564 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 NDUFA5P1-201ENST00000433858 341 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 AL132765.1-201ENST00000434165 553 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 AL133244.1-201ENST00000456007 258 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 RPL21P71-201ENST00000465598 459 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 RPL7L1P8-201ENST00000469911 741 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 MTATP6P25-201ENST00000574491 261 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 AC068790.7-201ENST00000602347 528 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 AL021707.7-201ENST00000607991 416 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 AL592295.2-201ENST00000612578 206 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 RNVU1-4-201ENST00000612985 164 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 MIR6780A-201ENST00000615089 68 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 AP005019.3-201ENST00000620418 560 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 AP005264.7-201ENST00000625003 745 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.72□□□□□ -1.81
HMG20AQ9NP66 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HMG20AQ9NP66 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
HMG20AQ9NP66 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
HMG20AQ9NP66 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
HMG20AQ9NP66 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 OR4K15-201ENST00000305051 1216 ntBASIC3.71□□□□□ -1.82
HMG20AQ9NP66 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 RNU6-152P-201ENST00000384037 107 ntBASIC3.71□□□□□ -1.82
HMG20AQ9NP66 AC007394.1-201ENST00000421941 531 ntBASIC3.71□□□□□ -1.82
HMG20AQ9NP66 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 AL392003.1-201ENST00000434394 243 ntBASIC3.71□□□□□ -1.82
HMG20AQ9NP66 AL138787.1-202ENST00000437804 898 ntBASIC3.71□□□□□ -1.82
HMG20AQ9NP66 AC004801.2-202ENST00000463559 283 ntBASIC3.71□□□□□ -1.82
HMG20AQ9NP66 AC053481.1-201ENST00000467217 306 ntBASIC3.71□□□□□ -1.82
HMG20AQ9NP66 AP000926.1-201ENST00000479573 241 ntBASIC3.71□□□□□ -1.82
HMG20AQ9NP66 LARP7P4-201ENST00000481075 878 ntBASIC3.71□□□□□ -1.82
HMG20AQ9NP66 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.71□□□□□ -1.82
HMG20AQ9NP66 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms