Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC109462.1-201ENST00000491087 368 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AC093720.1-201ENST00000505681 714 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 HAUS8P1-201ENST00000549005 542 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AC004217.3-201ENST00000551552 878 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 MIR5708-201ENST00000579723 85 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AC233702.9-201ENST00000581528 203 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AC011453.2-201ENST00000603737 729 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 MEMO1P5-201ENST00000604810 406 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AC013244.3-201ENST00000605614 388 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AL121612.2-201ENST00000612261 482 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AC012414.7-202ENST00000622705 1090 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AC008993.2-201ENST00000631744 806 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 AC107068.1-201ENST00000563286 4218 ntBASIC4.69□□□□□ -1.66
BRF2Q9HAW0 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
BRF2Q9HAW0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 RNA5SP391-201ENST00000363456 119 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 RNU4-68P-201ENST00000364314 141 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AL357515.1-201ENST00000402967 542 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 SFR1P1-201ENST00000403720 688 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 GSTA8P-201ENST00000404253 637 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AP002530.1-201ENST00000405705 684 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 RN7SKP273-201ENST00000411392 314 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 Z75741.2-201ENST00000417272 1167 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AL355433.1-201ENST00000422804 300 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 ZNF886P-201ENST00000450781 723 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 PTGES3P5-201ENST00000455109 434 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 CYCSP34-201ENST00000458172 304 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 BX284632.1-201ENST00000478218 541 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC011037.1-201ENST00000483964 558 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 HMGB1P21-201ENST00000502313 581 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC073358.1-201ENST00000505671 684 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC006499.3-201ENST00000506077 748 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC004980.4-201ENST00000513375 203 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 RNA5SP34-201ENST00000516887 130 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 SOD1P3-201ENST00000518682 454 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 OR5M2P-201ENST00000529003 936 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 OR4C2P-201ENST00000530855 1064 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC005191.1-201ENST00000603950 358 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC010424.2-201ENST00000607594 443 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AP001521.2-201ENST00000608772 546 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC009974.1-201ENST00000608881 455 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC009237.15-201ENST00000610252 501 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AL592148.2-201ENST00000612210 372 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC124312.6-202ENST00000623624 418 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 AC107081.3-201ENST00000612715 2034 ntBASIC4.68□□□□□ -1.66
BRF2Q9HAW0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
BRF2Q9HAW0 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms