Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 AC107398.1-201ENST00000486904 505 ntBASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 RNA5SP154-201ENST00000516193 111 ntBASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 AC137768.1-201ENST00000549998 553 ntBASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 AL161713.1-201ENST00000555538 145 ntBASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 AC115085.1-201ENST00000588924 229 ntBASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 OR6R2P-201ENST00000609216 300 ntBASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 AP004607.9-201ENST00000618202 316 ntBASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 AC074276.2-201ENST00000619891 348 ntBASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 EIF2AP4-201ENST00000424793 1781 ntBASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRRC40Q9H9A6 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
LRRC40Q9H9A6 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LRRC40Q9H9A6 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
LRRC40Q9H9A6 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LRRC40Q9H9A6 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.34□□□□□ -1.72
LRRC40Q9H9A6 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
LRRC40Q9H9A6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
LRRC40Q9H9A6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 USP9YP4-201ENST00000424401 1745 ntBASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 AC012020.1-201ENST00000624541 1728 ntBASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 CYB5AP4-201ENST00000396692 399 ntBASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 RPL23AP48-201ENST00000406913 488 ntBASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 CNOT7P1-201ENST00000429006 852 ntBASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 AC090543.1-201ENST00000492168 485 ntBASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 BNIP3P41-201ENST00000503774 571 ntBASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 AC093720.1-201ENST00000505681 714 ntBASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 AC017037.1-201ENST00000508460 471 ntBASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 AL592156.1-201ENST00000508758 304 ntBASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 AC010285.3-201ENST00000511668 676 ntBASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 RNU6-889P-201ENST00000517189 103 ntBASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 OR8G5-201ENST00000524943 1041 ntBASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 MIR4715-201ENST00000584117 79 ntBASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 AC138907.10-201ENST00000623708 983 ntBASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRRC40Q9H9A6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 MTCO1P8-201ENST00000416914 1523 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 AC006042.3-201ENST00000454684 1469 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 MFSD8-220ENST00000641243 1422 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 MIR93-201ENST00000385024 80 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 AL583835.1-201ENST00000399570 407 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 RPS4XP9-201ENST00000405151 780 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 AL157831.1-201ENST00000426134 473 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 AL445528.1-201ENST00000426330 420 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 HMGB1P5-202ENST00000451497 985 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 AL121877.1-201ENST00000453704 622 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 RN7SL585P-201ENST00000470538 280 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 RPS29P22-201ENST00000472363 168 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 S100A11P1-201ENST00000477525 312 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 AC007686.1-201ENST00000488511 463 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms