Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 MTND1P6-201ENST00000523621 946 ntBASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 AC107027.3-201ENST00000565095 3473 ntBASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 AC116667.1-201ENST00000604855 2072 ntBASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 AL627171.1-201ENST00000618845 1308 ntBASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 AC005261.4-201ENST00000600047 1385 ntBASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
UPF3BQ9BZI7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 AC018529.3-201ENST00000624212 2254 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 SPRR2C-201ENST00000290702 219 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 RNA5SP513-201ENST00000364648 118 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 RNU6-1320P-201ENST00000390838 107 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 RNU6-1269P-201ENST00000391139 107 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 SNORA3C-201ENST00000408792 125 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 RNA5SP317-201ENST00000410176 116 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 RNA5SP311-201ENST00000411290 116 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 TRIM60P17-201ENST00000415181 719 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 IPMKP1-201ENST00000425988 855 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 NANOGP6-201ENST00000429190 847 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 BTF3P10-201ENST00000433415 495 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 RPL36AP13-201ENST00000457490 317 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 RNA5SP246-201ENST00000458909 119 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 RNU6-599P-201ENST00000459383 107 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 RNU6-1193P-201ENST00000459461 107 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 RPL31P61-201ENST00000496160 376 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 RNA5SP315-201ENST00000516340 116 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 RNA5SP312-201ENST00000517068 116 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 IGHV3-63-201ENST00000518422 341 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 BNIP3P11-201ENST00000603878 563 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 MIR7151-201ENST00000617477 60 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 RNU6-368P-201ENST00000620928 107 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 RNU6-538P-201ENST00000622329 107 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 MIR3653-201ENST00000625572 110 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 BMS1P21-201ENST00000634565 365 ntBASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
UPF3BQ9BZI7 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 SNORD46.1-201ENST00000364139 104 ntBASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 Y_RNA.333-201ENST00000365274 102 ntBASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 RNA5SP366-201ENST00000365454 123 ntBASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 MTND4LP21-201ENST00000415303 295 ntBASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 OR51A6P-201ENST00000418680 1004 ntBASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 AL358472.1-201ENST00000431295 329 ntBASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 AL138787.1-202ENST00000437804 898 ntBASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 AL357520.1-201ENST00000441557 453 ntBASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 RN7SL542P-201ENST00000467147 294 ntBASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 UBA52P3-201ENST00000491303 382 ntBASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 AC099522.1-202ENST00000514718 367 ntBASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 RNU6-943P-201ENST00000516960 98 ntBASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 CD24P2-201ENST00000565486 219 ntBASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 OR1AB1P-201ENST00000585564 761 ntBASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 AL591034.3-201ENST00000605511 685 ntBASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 AC004777.1-201ENST00000624317 287 ntBASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 AP005264.7-201ENST00000625003 745 ntBASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
UPF3BQ9BZI7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms