Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5□□□□□ -1.61
RPAP1Q9BWH6 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5□□□□□ -1.61
RPAP1Q9BWH6 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5□□□□□ -1.61
RPAP1Q9BWH6 ALDH7A1P3-201ENST00000492517 345 ntBASIC5□□□□□ -1.61
RPAP1Q9BWH6 AC146944.2-203ENST00000502493 354 ntBASIC5□□□□□ -1.61
RPAP1Q9BWH6 AC010460.1-201ENST00000507087 466 ntBASIC5□□□□□ -1.61
RPAP1Q9BWH6 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5□□□□□ -1.61
RPAP1Q9BWH6 AC139495.1-202ENST00000513164 354 ntBASIC5□□□□□ -1.61
RPAP1Q9BWH6 MTND4LP31-201ENST00000514859 294 ntBASIC5□□□□□ -1.61
RPAP1Q9BWH6 AF186190.1-201ENST00000517470 480 ntBASIC5□□□□□ -1.61
RPAP1Q9BWH6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5□□□□□ -1.61
RPAP1Q9BWH6 OR7E10P-201ENST00000526420 991 ntBASIC5□□□□□ -1.61
RPAP1Q9BWH6 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5□□□□□ -1.61
RPAP1Q9BWH6 AC008126.1-201ENST00000549019 480 ntBASIC5□□□□□ -1.61
RPAP1Q9BWH6 AC074276.2-201ENST00000619891 348 ntBASIC5□□□□□ -1.61
RPAP1Q9BWH6 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5□□□□□ -1.61
RPAP1Q9BWH6 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
RPAP1Q9BWH6 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 OR11H4-201ENST00000315409 1082 ntBASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 RNU6-1331P-201ENST00000363658 106 ntBASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 NANOGP6-201ENST00000429190 847 ntBASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 RPS29P7-201ENST00000439662 171 ntBASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 ARAFP2-201ENST00000440565 559 ntBASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 RPL36AP13-201ENST00000457490 317 ntBASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 RPS26P15-201ENST00000488067 348 ntBASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 AC063950.1-201ENST00000552036 308 ntBASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 AC010615.3-201ENST00000597319 394 ntBASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 AC039056.2-201ENST00000622261 511 ntBASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 AP005264.7-201ENST00000625003 745 ntBASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RPAP1Q9BWH6 CASC19-261ENST00000641853 1638 ntBASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 AC027290.2-201ENST00000623210 18662 ntBASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 AL607077.1-201ENST00000401718 499 ntBASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 VN1R31P-201ENST00000417498 730 ntBASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 RPL7P2-201ENST00000427639 268 ntBASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 AL451050.1-201ENST00000450126 415 ntBASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 AC239798.3-201ENST00000454459 408 ntBASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 AC133473.1-201ENST00000455173 299 ntBASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 AP005212.4-201ENST00000614206 710 ntBASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 ZNF962P-201ENST00000443465 3140 ntBASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 USP9YP4-201ENST00000424401 1745 ntBASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.98□□□□□ -1.61
RPAP1Q9BWH6 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 RNU6ATAC-201ENST00000408749 126 ntBASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 AC007389.2-201ENST00000434630 306 ntBASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 PTMAP3-201ENST00000447474 330 ntBASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 AL121877.1-201ENST00000453704 622 ntBASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 RPL7L1P8-201ENST00000469911 741 ntBASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 RN7SL585P-201ENST00000470538 280 ntBASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 HNRNPKP5-201ENST00000515300 253 ntBASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 IGHV3-63-201ENST00000518422 341 ntBASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 AC022655.2-201ENST00000577280 318 ntBASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 AC245100.2-201ENST00000454544 1679 ntBASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 ERCC6-202ENST00000374127 1782 ntBASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPAP1Q9BWH6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
RPAP1Q9BWH6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.61
RPAP1Q9BWH6 AC116667.1-201ENST00000604855 2072 ntBASIC4.96□□□□□ -1.61
RPAP1Q9BWH6 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms