Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 RNA5SP88-201ENST00000365560 109 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 ELOCP14-201ENST00000428070 331 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 ELOCP7-201ENST00000439968 331 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 PSPHP1-201ENST00000450062 261 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 AL606490.1-201ENST00000452266 765 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 VDAC2P4-201ENST00000452925 711 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 UBA52P7-201ENST00000486088 380 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 IGHV3-32-201ENST00000519182 355 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 AL365503.1-201ENST00000605247 905 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 AC087045.1-201ENST00000605856 382 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 AC018690.1-201ENST00000608144 626 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 AL138960.1-201ENST00000613838 513 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 MIR6837-201ENST00000620884 64 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 U6.107-201ENST00000637108 79 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 GTF2IP4-201ENST00000453092 2054 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 Z95114.1-201ENST00000624264 14574 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 AL049634.1-201ENST00000453770 1720 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 DNM1P47-203ENST00000571780 12667 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 PABPC1P6-201ENST00000445594 1829 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 AC139426.3-201ENST00000605648 2059 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 AL157700.1-201ENST00000561973 1432 ntBASIC6.53□□□□□ -1.36
SYNGAP1Q96PV0 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
SYNGAP1Q96PV0 Y_RNA.38-201ENST00000362617 102 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 RNA5SP234-201ENST00000363916 119 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 MT-TL1-201ENST00000386347 75 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 RNA5SP105-201ENST00000391123 113 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 RN7SKP285-201ENST00000410137 318 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 RNU6-77P-201ENST00000410554 91 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AIMP1P1-201ENST00000418670 937 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AL590762.4-201ENST00000425885 253 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 RPL7P36-201ENST00000444633 681 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 COX6CP18-201ENST00000448769 222 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AC104306.1-201ENST00000449702 371 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AC006463.2-201ENST00000473326 348 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AP000797.1-201ENST00000478870 387 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AC074255.1-201ENST00000511259 501 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 MIR2117-201ENST00000516780 80 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 CDC42P3-201ENST00000518493 633 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 IGJP1-201ENST00000522682 475 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 OR8L1P-201ENST00000534005 955 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AC137768.1-201ENST00000549998 553 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AL049779.3-201ENST00000557141 606 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AC091489.2-201ENST00000566263 604 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 MIR4420-201ENST00000583944 77 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AL049634.3-201ENST00000604968 457 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 RPSAP73-201ENST00000614820 330 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 uc_338.18-201ENST00000615451 175 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AC002553.4-201ENST00000616896 331 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AP001784.1-201ENST00000624107 428 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AC124864.2-201ENST00000624736 186 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 MTCO1P6-201ENST00000481192 1384 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 AC131971.1-201ENST00000332881 1482 ntBASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SYNGAP1Q96PV0 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms