Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
RFT1Q96AA3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.14□□□□□ -1.75
RFT1Q96AA3 AL391001.1-201ENST00000602747 715 ntBASIC4.14□□□□□ -1.75
RFT1Q96AA3 AC093799.2-201ENST00000610062 578 ntBASIC4.14□□□□□ -1.75
RFT1Q96AA3 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.14□□□□□ -1.75
RFT1Q96AA3 AC018926.3-201ENST00000618841 406 ntBASIC4.14□□□□□ -1.75
RFT1Q96AA3 AC017104.5-201ENST00000637647 639 ntBASIC4.14□□□□□ -1.75
RFT1Q96AA3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
RFT1Q96AA3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RFT1Q96AA3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.14□□□□□ -1.75
RFT1Q96AA3 AL136164.3-201ENST00000624429 3978 ntBASIC4.14□□□□□ -1.75
RFT1Q96AA3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RFT1Q96AA3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.14□□□□□ -1.75
RFT1Q96AA3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RFT1Q96AA3 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFT1Q96AA3 ASNSP1-204ENST00000641977 1664 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RFT1Q96AA3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFT1Q96AA3 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFT1Q96AA3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFT1Q96AA3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RFT1Q96AA3 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFT1Q96AA3 RNA5SP52-201ENST00000362448 134 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 RNU1-87P-201ENST00000363727 170 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RFT1Q96AA3 SNORA70-201ENST00000384436 135 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 DNAJC19P6-201ENST00000401853 280 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 AC079355.1-201ENST00000421770 223 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 AC241520.1-201ENST00000422654 1099 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 AL451139.1-201ENST00000434718 346 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 RPS7P2-201ENST00000435134 607 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 ELOCP11-201ENST00000436690 332 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 RPL12P11-201ENST00000439970 501 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 CNOT7P2-201ENST00000441051 832 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 ELOCP16-201ENST00000444494 332 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 GXYLT1P1-201ENST00000446657 490 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 snoU13.20-201ENST00000459180 104 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 BX284632.1-201ENST00000478218 541 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 RN7SL97P-201ENST00000486780 299 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 MTND5P21-201ENST00000531961 522 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RFT1Q96AA3 AC015912.2-201ENST00000571053 181 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 AC011447.4-201ENST00000587562 111 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 HMGB2P1-201ENST00000591146 634 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 RPL7P50-201ENST00000600588 727 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 AC243756.2-201ENST00000618406 463 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 AC007275.1-201ENST00000621243 671 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 AC000123.2-201ENST00000623124 461 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 AL590396.2-201ENST00000636511 1041 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.13□□□□□ -1.75
RFT1Q96AA3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RFT1Q96AA3 AL133412.1-201ENST00000380194 2992 ntBASIC4.13□□□□□ -1.75
RFT1Q96AA3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RFT1Q96AA3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFT1Q96AA3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFT1Q96AA3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFT1Q96AA3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFT1Q96AA3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFT1Q96AA3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFT1Q96AA3 AL512646.1-201ENST00000269395 1077 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 RNU1-106P-201ENST00000384382 164 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 RNU6-1257P-201ENST00000384625 110 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 Z97832.1-201ENST00000402490 328 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 RNA5SP345-201ENST00000410646 108 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 RNA5SP104-201ENST00000410989 118 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 MTND2P15-201ENST00000418575 892 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 RPS17P8-201ENST00000434525 335 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.12□□□□□ -1.75
RFT1Q96AA3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.12□□□□□ -1.75
RFT1Q96AA3 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFT1Q96AA3 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms