Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL512646.1-201ENST00000269395 1077 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 SNORD113-6-201ENST00000363345 75 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 RNU6-619P-201ENST00000365146 108 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
HPS3Q969F9 RNU2-65P-201ENST00000410162 185 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 RNU6-272P-201ENST00000411028 104 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.55□□□□□ -1.52
HPS3Q969F9 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.55□□□□□ -1.52
HPS3Q969F9 QRSL1P2-201ENST00000418582 964 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 AC013429.2-201ENST00000418798 781 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 AC006960.1-201ENST00000419980 153 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.55□□□□□ -1.52
HPS3Q969F9 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.55□□□□□ -1.52
HPS3Q969F9 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HPS3Q969F9 PTMAP6-201ENST00000439110 327 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 ACTR3P2-201ENST00000439585 1257 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 RPS29P9-201ENST00000440360 171 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 MTND2P22-201ENST00000444325 1033 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 AC104978.1-201ENST00000449387 391 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 AL356981.1-201ENST00000454879 684 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.55□□□□□ -1.52
HPS3Q969F9 PNPLA4P1-201ENST00000458328 305 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 RN7SL441P-201ENST00000492388 296 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.55□□□□□ -1.52
HPS3Q969F9 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.55□□□□□ -1.52
HPS3Q969F9 AC231760.1-201ENST00000498002 260 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 AC010486.2-201ENST00000505572 483 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.55□□□□□ -1.52
HPS3Q969F9 RNU6-347P-201ENST00000516658 105 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.55□□□□□ -1.52
HPS3Q969F9 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.55□□□□□ -1.52
HPS3Q969F9 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.55□□□□□ -1.52
HPS3Q969F9 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.55□□□□□ -1.52
HPS3Q969F9 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.55□□□□□ -1.52
HPS3Q969F9 AL137072.1-201ENST00000603444 466 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 TAS2R6P-201ENST00000605022 826 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 MIR7155-201ENST00000615925 56 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 AL121890.2-201ENST00000617644 465 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 AC234782.5-201ENST00000617723 324 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.55□□□□□ -1.52
HPS3Q969F9 AC131159.1-201ENST00000621854 213 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 AC007490.1-201ENST00000624321 703 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.55□□□□□ -1.52
HPS3Q969F9 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.55□□□□□ -1.52
HPS3Q969F9 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HPS3Q969F9 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.55□□□□□ -1.52
HPS3Q969F9 AC010329.2-201ENST00000595195 2737 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 AC134882.1-201ENST00000603738 1676 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 AC005332.5-201ENST00000591222 2919 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.55□□□□□ -1.52
HPS3Q969F9 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
HPS3Q969F9 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.55□□□□□ -1.52
HPS3Q969F9 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HPS3Q969F9 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HPS3Q969F9 AL731532.2-201ENST00000623542 1953 ntBASIC5.55□□□□□ -1.52
HPS3Q969F9 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HPS3Q969F9 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HPS3Q969F9 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HPS3Q969F9 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.54□□□□□ -1.52
HPS3Q969F9 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HPS3Q969F9 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.54□□□□□ -1.52
HPS3Q969F9 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.54□□□□□ -1.52
HPS3Q969F9 MIR92A2-201ENST00000385299 75 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 TAF9BP1-201ENST00000396646 746 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 AL356131.1-201ENST00000405826 414 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HPS3Q969F9 MFSD13B-201ENST00000420133 1290 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 MRPS36P1-201ENST00000421291 307 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 SEPT7P5-201ENST00000434048 306 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 AC073143.1-201ENST00000436316 395 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.54□□□□□ -1.52
HPS3Q969F9 AC092393.1-201ENST00000439625 742 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 KNOP1P3-201ENST00000446933 426 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 RPL7L1P1-201ENST00000448259 785 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.54□□□□□ -1.52
HPS3Q969F9 AL645937.3-201ENST00000453647 936 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.54□□□□□ -1.52
HPS3Q969F9 AL133477.1-201ENST00000457472 514 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.54□□□□□ -1.52
HPS3Q969F9 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.54□□□□□ -1.52
HPS3Q969F9 MRPS33P2-201ENST00000507850 322 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 OR5H4P-201ENST00000510851 923 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.54□□□□□ -1.52
HPS3Q969F9 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HPS3Q969F9 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.54□□□□□ -1.52
HPS3Q969F9 PDCL2P2-201ENST00000533651 189 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.54□□□□□ -1.52
HPS3Q969F9 AP000619.3-201ENST00000535634 1127 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 AC005868.1-201ENST00000536421 331 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.54□□□□□ -1.52
HPS3Q969F9 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.54□□□□□ -1.52
HPS3Q969F9 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.54□□□□□ -1.52
HPS3Q969F9 AC006116.3-201ENST00000592968 361 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 AL121612.2-201ENST00000612261 482 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.54□□□□□ -1.52
HPS3Q969F9 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.54□□□□□ -1.52
HPS3Q969F9 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.54□□□□□ -1.52
HPS3Q969F9 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms