Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC010329.1-201ENST00000593903 8328 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AC015689.2-201ENST00000528172 1738 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 RNU5E-5P-201ENST00000365379 116 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 Y_RNA.474-201ENST00000384341 102 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AL360271.1-201ENST00000395679 510 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 RPS3AP2-201ENST00000407190 754 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 MIR1284-201ENST00000408337 120 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 MIR548I3-201ENST00000408378 149 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 MIR548I1-201ENST00000408810 149 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AC245054.2-201ENST00000415639 319 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AC114482.1-201ENST00000418010 247 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AC007394.1-201ENST00000421941 531 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AL445665.1-202ENST00000452436 324 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 PPIAP19-201ENST00000486414 492 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 ACTG1P13-201ENST00000486987 1043 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 RPL7P51-201ENST00000490532 749 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AC103851.1-201ENST00000506833 274 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 RNU6-1281P-201ENST00000516223 105 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AC109635.6-201ENST00000525487 1113 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AP001542.2-201ENST00000593141 364 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 SUMO2P14-201ENST00000604488 293 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AL139099.4-201ENST00000614802 114 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AL139089.1-201ENST00000620372 975 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 TPTEP1-208ENST00000636884 213 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 OR13C1P-202ENST00000641378 2919 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 AC109315.1-201ENST00000584143 1347 ntBASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
NEDD1Q8NHV4 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 Y_RNA.315-201ENST00000365117 102 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 RNU6-43P-201ENST00000384302 107 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 RN7SKP29-201ENST00000410957 272 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 AL389915.1-201ENST00000422463 466 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 SNRPEP4-201ENST00000435815 279 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 AL672138.1-201ENST00000450604 1015 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 FABP3P2-201ENST00000453169 399 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 AC090013.1-201ENST00000485147 480 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 Y_RNA.720-201ENST00000517166 92 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 IGLVIV-64-201ENST00000518581 301 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 HMGN2P36-201ENST00000529541 409 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 AC079600.1-201ENST00000550326 297 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 AC137800.2-201ENST00000574375 120 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 TXNP4-201ENST00000575018 310 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 AC009597.2-201ENST00000604659 592 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 AC004853.1-201ENST00000604902 698 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 AC127024.6-201ENST00000621598 424 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
NEDD1Q8NHV4 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms