Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC115286.1-201ENST00000604298 434 ntBASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 AL034351.1-201ENST00000605288 668 ntBASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 UBE3AP2-201ENST00000429033 2259 ntBASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC112Q8NEF3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 AC107021.2-201ENST00000567714 2095 ntBASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 AC006504.1-201ENST00000562493 3666 ntBASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 AC126755.2-208ENST00000327792 462 ntBASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 AC138969.1-213ENST00000331436 462 ntBASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 AC068538.1-201ENST00000376856 336 ntBASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 AL583835.1-201ENST00000399570 407 ntBASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 RPL23AP46-201ENST00000438548 490 ntBASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 RPL23AP52-201ENST00000439311 478 ntBASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 AL133244.1-201ENST00000456007 258 ntBASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 AC106872.2-201ENST00000494303 480 ntBASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 RNU7-143P-201ENST00000516781 65 ntBASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 AC090312.1-201ENST00000580637 348 ntBASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 Z82195.1-201ENST00000604558 398 ntBASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 MLECP1-201ENST00000615893 709 ntBASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 AL445363.3-201ENST00000623080 671 ntBASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CCDC112Q8NEF3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC112Q8NEF3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC112Q8NEF3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 SEPT7P2-202ENST00000398921 823 ntBASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 RNU4-25P-201ENST00000410569 230 ntBASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 TMSB10P2-201ENST00000416049 131 ntBASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 KCTD9P3-201ENST00000434597 1169 ntBASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 AC009963.2-201ENST00000453431 138 ntBASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 MTCO3P20-201ENST00000454926 688 ntBASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 APOOP2-201ENST00000461561 539 ntBASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 AL672167.3-201ENST00000465951 960 ntBASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 AC021146.1-201ENST00000511202 716 ntBASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 AC026726.1-201ENST00000512859 601 ntBASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 AC084783.1-201ENST00000565846 910 ntBASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 AC022968.1-201ENST00000567372 442 ntBASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 RPL23AP87-202ENST00000573039 466 ntBASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 MIR6716-201ENST00000613413 80 ntBASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 U7.8-201ENST00000619968 63 ntBASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 AP000756.2-201ENST00000624168 2567 ntBASIC4.46□□□□□ -1.7
CCDC112Q8NEF3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 AC025031.4-201ENST00000621248 3271 ntBASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 OR4K17-201ENST00000315543 1032 ntBASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 RNU4-39P-201ENST00000362455 127 ntBASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 U3.22-201ENST00000391120 215 ntBASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 NPM1P34-201ENST00000428821 893 ntBASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 AC092809.1-201ENST00000441469 474 ntBASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 MTCO3P16-201ENST00000454456 754 ntBASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 PPIAP21-201ENST00000464473 501 ntBASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 RPL21P126-201ENST00000470049 478 ntBASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 AC109327.1-201ENST00000471666 403 ntBASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 snoU109.6-201ENST00000516831 118 ntBASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 MTND1P6-201ENST00000523621 946 ntBASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC112Q8NEF3 AC099489.2-201ENST00000574976 260 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms