Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 CBX3P5-201ENST00000552017 521 ntBASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 MIR3138-201ENST00000585238 82 ntBASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 LARP1BP1-201ENST00000506036 1359 ntBASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 OR10AB1P-202ENST00000641219 1686 ntBASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 AC092079.1-201ENST00000558620 1985 ntBASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC65Q8IXS2 XIAPP3-201ENST00000312918 795 ntBASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 SNORA37-201ENST00000384504 129 ntBASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 MIR513A2-201ENST00000385249 127 ntBASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 MIR1183-201ENST00000408856 89 ntBASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 RNU6-603P-201ENST00000411403 107 ntBASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 CCT8P1-201ENST00000413611 1657 ntBASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 RPL23AP38-201ENST00000423801 469 ntBASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 MTND2P2-201ENST00000434633 945 ntBASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 RAB28P3-201ENST00000448325 597 ntBASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 AL354710.1-201ENST00000453641 246 ntBASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 RN7SL481P-201ENST00000477764 299 ntBASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 AC105137.1-201ENST00000484355 562 ntBASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 AC092045.1-201ENST00000495716 1231 ntBASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 AC093824.1-201ENST00000508796 343 ntBASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 AC097504.1-201ENST00000515103 2415 ntBASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 VN1R79P-201ENST00000593540 513 ntBASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 AC005261.4-201ENST00000600047 1385 ntBASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CCDC65Q8IXS2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC65Q8IXS2 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC65Q8IXS2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 AC116667.1-201ENST00000604855 2072 ntBASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 AL356317.1-201ENST00000396110 1436 ntBASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 RNU6-670P-201ENST00000364312 104 ntBASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 MIR93-201ENST00000385024 80 ntBASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 OR6C69P-201ENST00000394268 893 ntBASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 PGBD4P8-201ENST00000412993 562 ntBASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 AC006011.1-201ENST00000442758 349 ntBASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 AC025554.1-201ENST00000505641 188 ntBASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 AC020593.1-201ENST00000507399 299 ntBASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 SNORD116-26-201ENST00000516006 96 ntBASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 RPL23AP87-202ENST00000573039 466 ntBASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 AL139395.1-201ENST00000603662 160 ntBASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 AC010680.3-201ENST00000604215 520 ntBASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 AC090246.1-201ENST00000616499 426 ntBASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 MIR8059-201ENST00000620427 81 ntBASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 AC000123.2-201ENST00000623124 461 ntBASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 LINC02471-203ENST00000641941 4752 ntBASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CCDC65Q8IXS2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC65Q8IXS2 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC65Q8IXS2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCDC65Q8IXS2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC65Q8IXS2 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC65Q8IXS2 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms