Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AL161909.1-201ENST00000397390 712 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 TAF9BP2-201ENST00000400856 499 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AC234779.1-201ENST00000425910 285 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 PTP4A1P3-201ENST00000433661 420 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AC069285.2-201ENST00000440210 275 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 EEF1A1P1-201ENST00000447052 739 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 TPT1P12-201ENST00000448968 492 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 ABCF2P2-201ENST00000450549 296 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AC022431.1-201ENST00000450941 438 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AC133473.1-201ENST00000455173 299 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 RPL23AP81-201ENST00000455252 467 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AC010618.1-201ENST00000469924 477 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 SYT14P1-201ENST00000481459 721 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AC104164.2-201ENST00000496953 495 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 SNORA26.10-201ENST00000516427 141 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 RNU6-467P-201ENST00000517027 110 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AC138701.1-201ENST00000524329 714 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AC100770.1-201ENST00000532310 322 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AL136520.1-202ENST00000555494 763 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AL049870.4-201ENST00000555741 486 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 TVP23BP1-201ENST00000557500 617 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 MTND6P33-201ENST00000571794 183 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 MIR3939-201ENST00000582614 106 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AL161729.3-201ENST00000603533 673 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AL049844.2-201ENST00000604280 628 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 FAM27D1-201ENST00000612308 341 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 OR52H1-202ENST00000641796 1061 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AL512283.1-201ENST00000606756 1384 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AC068254.2-201ENST00000623938 3577 ntBASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.96□□□□□ -1.78
C9orf40Q8IXQ3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 AC067945.1-201ENST00000342609 618 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 MIR383-201ENST00000362257 73 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 MIR320B1-201ENST00000390209 79 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 SNORA40.4-201ENST00000390971 128 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 AL049693.1-201ENST00000402760 611 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 DPY19L1P2-201ENST00000426647 915 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 ELOCP3-201ENST00000439303 348 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 RPS20P4-201ENST00000461659 355 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 RPS26P28-201ENST00000470806 348 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 RN7SL860P-201ENST00000473738 223 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 RPL23AP73-201ENST00000492507 471 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 PARP4P3-201ENST00000510265 317 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 RNA5SP73-201ENST00000516744 108 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 SNORA76.2-201ENST00000517095 137 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 AP003049.1-201ENST00000529418 457 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 CYCSP29-201ENST00000533731 318 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 SS18L2P2-201ENST00000583960 235 ntBASIC3.95□□□□□ -1.78
C9orf40Q8IXQ3 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms