Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.38□□□□□ -1.71
LINC00346Q8IVM7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
LINC00346Q8IVM7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
LINC00346Q8IVM7 AC009643.2-201ENST00000603543 1448 ntBASIC4.38□□□□□ -1.71
LINC00346Q8IVM7 AC000367.1-201ENST00000452711 1766 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC083843.3-201ENST00000623679 2186 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 SNURFL-201ENST00000309296 343 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 SNORA11.3-201ENST00000408471 128 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC096632.1-201ENST00000427395 310 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 MTCO1P3-201ENST00000429327 192 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 Z77249.1-201ENST00000444622 1175 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC104306.1-201ENST00000449702 371 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 PPIAP20-201ENST00000449839 135 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AL162388.1-201ENST00000450912 352 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 RPL5P30-201ENST00000465511 891 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC097484.1-201ENST00000471148 389 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 RN7SL222P-201ENST00000476452 299 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC018797.3-201ENST00000513388 1241 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 RNA5SP249-201ENST00000516127 99 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 SNORA19.3-201ENST00000516165 130 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC027308.1-201ENST00000517993 110 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 NMNAT1P1-201ENST00000554095 876 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 CYCSP40-201ENST00000575927 294 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 MIR4504-201ENST00000577413 92 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 MIR1269B-201ENST00000580405 75 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC113194.1-201ENST00000606037 500 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 MIR6768-201ENST00000610734 72 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 SNORA11.6-201ENST00000619030 128 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AC090506.2-201ENST00000624521 419 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 MIR6715B-201ENST00000637172 77 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AL355578.1-201ENST00000607405 1328 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 ELL2P4-201ENST00000446870 1376 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 CASC19-206ENST00000641028 1430 ntBASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LINC00346Q8IVM7 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 ECM1P2-201ENST00000503354 1577 ntBASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 RPL23P2-201ENST00000320371 421 ntBASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 RNU6-1243P-201ENST00000364028 107 ntBASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 MIR223-201ENST00000385204 110 ntBASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 BTBD10P2-201ENST00000404779 676 ntBASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 DDX39BP1-205ENST00000422507 192 ntBASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 C1DP1-201ENST00000426049 402 ntBASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 DPRXP1-201ENST00000426312 460 ntBASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 OR4F13P-201ENST00000428478 931 ntBASIC4.36□□□□□ -1.71
LINC00346Q8IVM7 RHOT1P3-201ENST00000436571 331 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms