Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BHLHA9Q7RTU4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.89□□□□□ -1.63
BHLHA9Q7RTU4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BHLHA9Q7RTU4 AC025574.1-201ENST00000554784 1653 ntBASIC4.89□□□□□ -1.63
BHLHA9Q7RTU4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.89□□□□□ -1.63
BHLHA9Q7RTU4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
BHLHA9Q7RTU4 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
BHLHA9Q7RTU4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.89□□□□□ -1.63
BHLHA9Q7RTU4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BHLHA9Q7RTU4 AC135352.1-201ENST00000506173 1418 ntBASIC4.89□□□□□ -1.63
BHLHA9Q7RTU4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 SNORA56-201ENST00000383966 129 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 MIR659-201ENST00000384963 97 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 RN7SKP267-201ENST00000410381 285 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 OFD1P18Y-201ENST00000420889 959 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 OR2AH1P-201ENST00000425717 928 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 ARPC3P1-201ENST00000437218 533 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 YWHAZP2-201ENST00000440317 728 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 ELOCP10-201ENST00000440624 327 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 TAF9P1-201ENST00000445421 515 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AL360221.1-201ENST00000445989 335 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 MTND6P5-201ENST00000448266 512 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 TAF9P2-201ENST00000454958 515 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 MTND2P30-201ENST00000456663 382 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC090142.1-201ENST00000465776 462 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC012123.2-201ENST00000485809 248 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 RPS23P1-201ENST00000491662 432 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC025164.1-201ENST00000496249 478 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 HMGB3P16-201ENST00000508037 287 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC007016.1-201ENST00000512110 244 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 RNA5SP303-201ENST00000516192 130 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC010476.1-201ENST00000519111 851 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC104383.1-201ENST00000530297 370 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 OR5AN2P-201ENST00000534535 896 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 GLYCAM1-201ENST00000546596 285 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 RPS3AP4-201ENST00000555161 764 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 ELOCP28-201ENST00000590044 317 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 VN1R90P-201ENST00000595717 726 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 VN1R88P-201ENST00000596787 292 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC087468.1-201ENST00000604365 630 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 ELOCP34-201ENST00000604436 327 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 U6atac.1-201ENST00000616025 117 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC004232.3-201ENST00000622977 525 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC015871.5-202ENST00000623252 701 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC124312.6-202ENST00000623624 418 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC007671.2-201ENST00000637344 619 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 ZNF542P-204ENST00000482727 1305 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AL442128.2-201ENST00000620246 1824 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 DHX40P1-201ENST00000588725 1412 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 THAP12P5-201ENST00000405864 2275 ntBASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BHLHA9Q7RTU4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
BHLHA9Q7RTU4 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BHLHA9Q7RTU4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BHLHA9Q7RTU4 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
BHLHA9Q7RTU4 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
BHLHA9Q7RTU4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
BHLHA9Q7RTU4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
BHLHA9Q7RTU4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.87□□□□□ -1.63
BHLHA9Q7RTU4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
BHLHA9Q7RTU4 AL359922.3-201ENST00000624779 1670 ntBASIC4.87□□□□□ -1.63
BHLHA9Q7RTU4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
BHLHA9Q7RTU4 AC021146.4-201ENST00000309229 279 ntBASIC4.87□□□□□ -1.63
BHLHA9Q7RTU4 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
BHLHA9Q7RTU4 SNORD113.2-201ENST00000364166 89 ntBASIC4.87□□□□□ -1.63
BHLHA9Q7RTU4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms