Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MIR1322-201ENST00000638013 71 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 CASC19-264ENST00000641912 1184 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 OR14L1P-202ENST00000641545 3009 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 SGO1P1-201ENST00000603525 1447 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC104118.1-201ENST00000607625 1589 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHFQ7M4L6 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHFQ7M4L6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHFQ7M4L6 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC011493.1-201ENST00000596753 1632 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHFQ7M4L6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHFQ7M4L6 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC025263.3-201ENST00000622965 1396 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC096656.1-201ENST00000623826 1364 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC097461.1-201ENST00000568928 2821 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHFQ7M4L6 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHFQ7M4L6 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHFQ7M4L6 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHFQ7M4L6 FAM133CP-201ENST00000332869 704 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 VDAC2P1-201ENST00000399358 958 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 RPL35AP24-201ENST00000413846 330 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 AL513325.1-201ENST00000417716 1034 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 CNOT7P1-201ENST00000429006 852 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 FABP7P2-201ENST00000429946 379 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC092162.1-201ENST00000432828 434 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC073143.1-201ENST00000436316 395 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 AL450263.2-201ENST00000439400 589 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 RPS29P9-201ENST00000440360 171 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 OR6K5P-201ENST00000447050 945 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 TCEA1P1-201ENST00000449716 880 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 OR52E7P-201ENST00000452394 933 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 AL445433.1-201ENST00000457507 257 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 RN7SL517P-201ENST00000462240 305 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC009127.1-201ENST00000467090 155 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 RPL5P23-201ENST00000496040 868 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC010486.2-201ENST00000505572 483 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 FABP5P12-201ENST00000515543 389 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 RNU6-347P-201ENST00000516658 105 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHFQ7M4L6 OR4C2P-201ENST00000530855 1064 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHFQ7M4L6 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 AL354943.1-201ENST00000572103 781 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC124856.1-201ENST00000600819 896 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 NTAN1P1-201ENST00000603150 646 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 AL021707.7-201ENST00000607991 416 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC105227.2-201ENST00000615075 605 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC018926.3-201ENST00000618841 406 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC015804.1-201ENST00000622935 435 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 AL157770.1-201ENST00000623049 439 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC104454.1-201ENST00000421341 1401 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHFQ7M4L6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHFQ7M4L6 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHFQ7M4L6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHFQ7M4L6 DDX18P5-201ENST00000534547 1306 ntBASIC4.43□□□□□ -1.7
SHFQ7M4L6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHFQ7M4L6 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.43□□□□□ -1.7
SHFQ7M4L6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHFQ7M4L6 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 BX005019.1-201ENST00000561881 1810 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SHFQ7M4L6 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 RNU1-43P-201ENST00000365052 165 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 OR3A2-201ENST00000408891 1076 ntBASIC4.42□□□□□ -1.7
SHFQ7M4L6 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.42□□□□□ -1.7
SHFQ7M4L6 MTND4P22-201ENST00000413116 1169 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms