Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 HMGB1P10-201ENST00000395823 563 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 EI24P3-201ENST00000399046 1062 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AL109941.1-201ENST00000401925 229 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 GSTA8P-201ENST00000404253 637 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 PTP4A1P5-201ENST00000420305 455 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 MTND4P6-201ENST00000438297 472 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 CEACAMP7-201ENST00000444105 496 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 SEPT14P24-201ENST00000447236 180 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 OTX2P1-201ENST00000450956 354 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 RPS27AP8-201ENST00000452665 445 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 GTF2IP12-201ENST00000456547 356 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 RPS3AP43-201ENST00000479743 781 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AC004453.1-201ENST00000487895 408 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AC079203.1-201ENST00000487972 404 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AC104971.1-201ENST00000495117 578 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 OR5M14P-201ENST00000506803 618 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 BTG4P1-201ENST00000510421 183 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 RNU5A-4P-201ENST00000516588 111 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AC008015.1-201ENST00000555505 465 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AL354943.1-201ENST00000572103 781 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AL020997.3-201ENST00000602843 359 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AC135507.1-201ENST00000607214 561 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AC133644.2-201ENST00000608142 540 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 AP000255.1-201ENST00000610276 676 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 VIS1.1-201ENST00000610517 203 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 FAM27B-201ENST00000610601 213 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 MIR6719-201ENST00000622428 87 ntBASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
ZNF549Q6P9A3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 MTCO1P56-201ENST00000401674 224 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AL080315.1-201ENST00000406055 466 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 RPS7P9-201ENST00000414704 586 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AC004074.1-201ENST00000421810 1063 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 RPF2P1-201ENST00000424137 906 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AC007559.1-201ENST00000428736 355 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AC005189.1-201ENST00000431286 310 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 RPS27P18-201ENST00000431701 247 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 LYPLA1P1-201ENST00000434514 622 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AC092393.1-201ENST00000439625 742 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 ELOCP30-201ENST00000447108 299 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 RPL31P3-201ENST00000458430 332 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 RN7SL515P-201ENST00000463999 297 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 SCARNA22-201ENST00000503991 125 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AC111000.2-201ENST00000507775 550 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AC008837.1-201ENST00000511513 412 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AC104417.1-201ENST00000523974 751 ntBASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.69□□□□□ -1.66
ZNF549Q6P9A3 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms