Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.06□□□□□ -1.76
NIPAL3Q6P499 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.06□□□□□ -1.76
NIPAL3Q6P499 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
NIPAL3Q6P499 AC022031.1-201ENST00000585985 2593 ntBASIC4.06□□□□□ -1.76
NIPAL3Q6P499 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 MTND5P11-201ENST00000511037 1812 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 RNU6-984P-201ENST00000363236 109 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 RNU1-87P-201ENST00000363727 170 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 RNA5SP397-201ENST00000391323 118 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AC069213.2-201ENST00000420238 366 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 RAD23BP1-201ENST00000421404 1227 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 ARL2BPP10-201ENST00000446487 531 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 MTND2P30-201ENST00000456663 382 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 TRBV8-2-201ENST00000475637 270 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 RPL23AP72-201ENST00000492447 435 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 NDUFB4P12-201ENST00000513465 390 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AP001781.1-201ENST00000530977 207 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AL161713.1-201ENST00000555538 145 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AC069061.3-201ENST00000582254 823 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 BPIFA4P-203ENST00000603168 689 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 BX323046.1-201ENST00000610145 535 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AL133243.1-201ENST00000614487 366 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 MIR6780A-201ENST00000615089 68 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 SNX18P1Y-201ENST00000616231 511 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 LINC01808-202ENST00000641680 1116 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AC022893.2-201ENST00000564832 3296 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 KARSP3-201ENST00000571212 1504 ntBASIC4.05□□□□□ -1.76
NIPAL3Q6P499 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
NIPAL3Q6P499 AL049737.1-201ENST00000413920 1403 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 SAGE2P-201ENST00000420011 2126 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 SNORD113.2-201ENST00000364166 89 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 SNORA70F-201ENST00000384142 135 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 MIR585-201ENST00000384887 94 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 MIR937-201ENST00000401271 86 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 RPS24P12-201ENST00000402084 394 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 SNORA74C-2-201ENST00000411179 201 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AL590139.1-201ENST00000416267 400 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC023128.2-201ENST00000420880 1223 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 PNRC2P1-201ENST00000423940 420 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC073335.1-201ENST00000427776 363 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AL162591.2-201ENST00000449634 317 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 CYCSP42-201ENST00000450823 238 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AL513533.1-201ENST00000453728 415 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 SBDSP1-204ENST00000453858 737 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 DDX39BP2-208ENST00000453923 258 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 RPL5P30-201ENST00000465511 891 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.04□□□□□ -1.76
NIPAL3Q6P499 MTATP6P22-201ENST00000507369 598 ntBASIC4.04□□□□□ -1.76
NIPAL3Q6P499 AC010468.3-201ENST00000508225 458 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms