Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 FAM91A3P-201ENST00000456826 2544 ntBASIC4.83□□□□□ -1.64
RFX7Q2KHR2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RFX7Q2KHR2 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.83□□□□□ -1.64
RFX7Q2KHR2 Z82217.1-201ENST00000625157 8149 ntBASIC4.83□□□□□ -1.64
RFX7Q2KHR2 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RFX7Q2KHR2 AC000123.3-201ENST00000624029 4975 ntBASIC4.82□□□□□ -1.64
RFX7Q2KHR2 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.82□□□□□ -1.64
RFX7Q2KHR2 RNA5SP387-201ENST00000364226 106 ntBASIC4.82□□□□□ -1.64
RFX7Q2KHR2 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RFX7Q2KHR2 RNA5SP44-201ENST00000410446 133 ntBASIC4.82□□□□□ -1.64
RFX7Q2KHR2 JKAMPP1-201ENST00000413804 919 ntBASIC4.82□□□□□ -1.64
RFX7Q2KHR2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.82□□□□□ -1.64
RFX7Q2KHR2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.82□□□□□ -1.64
RFX7Q2KHR2 AC010469.1-201ENST00000463864 576 ntBASIC4.82□□□□□ -1.64
RFX7Q2KHR2 RPL7P24-201ENST00000493052 752 ntBASIC4.82□□□□□ -1.64
RFX7Q2KHR2 AC139783.2-201ENST00000504847 1145 ntBASIC4.82□□□□□ -1.64
RFX7Q2KHR2 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.82□□□□□ -1.64
RFX7Q2KHR2 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFX7Q2KHR2 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
RFX7Q2KHR2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.82□□□□□ -1.64
RFX7Q2KHR2 AL358913.1-201ENST00000554342 121 ntBASIC4.82□□□□□ -1.64
RFX7Q2KHR2 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.82□□□□□ -1.64
RFX7Q2KHR2 MIR5685-201ENST00000579080 79 ntBASIC4.82□□□□□ -1.64
RFX7Q2KHR2 SNX6P1-201ENST00000601728 1224 ntBASIC4.82□□□□□ -1.64
RFX7Q2KHR2 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.82□□□□□ -1.64
RFX7Q2KHR2 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RFX7Q2KHR2 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.82□□□□□ -1.64
RFX7Q2KHR2 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 MIR208A-201ENST00000362287 71 ntBASIC4.81□□□□□ -1.64
RFX7Q2KHR2 RPL17P50-201ENST00000396131 546 ntBASIC4.81□□□□□ -1.64
RFX7Q2KHR2 RNU6ATAC-201ENST00000408749 126 ntBASIC4.81□□□□□ -1.64
RFX7Q2KHR2 NOTCH2P1-201ENST00000443481 624 ntBASIC4.81□□□□□ -1.64
RFX7Q2KHR2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 RPS6P2-201ENST00000454208 705 ntBASIC4.81□□□□□ -1.64
RFX7Q2KHR2 NDUFA5P2-201ENST00000519723 344 ntBASIC4.81□□□□□ -1.64
RFX7Q2KHR2 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 AC007991.1-201ENST00000522680 631 ntBASIC4.81□□□□□ -1.64
RFX7Q2KHR2 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 AC090312.1-201ENST00000580637 348 ntBASIC4.81□□□□□ -1.64
RFX7Q2KHR2 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 AL606490.9-201ENST00000603331 271 ntBASIC4.81□□□□□ -1.64
RFX7Q2KHR2 AC233280.2-201ENST00000603917 1070 ntBASIC4.81□□□□□ -1.64
RFX7Q2KHR2 AL121772.2-201ENST00000614331 297 ntBASIC4.81□□□□□ -1.64
RFX7Q2KHR2 AL354798.1-201ENST00000622505 329 ntBASIC4.81□□□□□ -1.64
RFX7Q2KHR2 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RFX7Q2KHR2 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 MIR448-201ENST00000362131 111 ntBASIC4.8□□□□□ -1.64
RFX7Q2KHR2 RNU6-761P-201ENST00000384148 107 ntBASIC4.8□□□□□ -1.64
RFX7Q2KHR2 U8.11-201ENST00000384699 133 ntBASIC4.8□□□□□ -1.64
RFX7Q2KHR2 U8.12-201ENST00000384701 133 ntBASIC4.8□□□□□ -1.64
RFX7Q2KHR2 MIR199A2-201ENST00000385289 110 ntBASIC4.8□□□□□ -1.64
RFX7Q2KHR2 SNORA11.1-201ENST00000408133 129 ntBASIC4.8□□□□□ -1.64
RFX7Q2KHR2 SNORA79B-201ENST00000410557 148 ntBASIC4.8□□□□□ -1.64
RFX7Q2KHR2 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 AL450992.3-201ENST00000413192 568 ntBASIC4.8□□□□□ -1.64
RFX7Q2KHR2 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 HIGD1AP4-201ENST00000430194 280 ntBASIC4.8□□□□□ -1.64
RFX7Q2KHR2 AL035246.1-201ENST00000433554 1255 ntBASIC4.8□□□□□ -1.64
RFX7Q2KHR2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 U8.18-201ENST00000459285 133 ntBASIC4.8□□□□□ -1.64
RFX7Q2KHR2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 AL139395.1-201ENST00000603662 160 ntBASIC4.8□□□□□ -1.64
RFX7Q2KHR2 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 AC099669.2-201ENST00000616549 437 ntBASIC4.8□□□□□ -1.64
RFX7Q2KHR2 AP001005.3-201ENST00000622049 129 ntBASIC4.8□□□□□ -1.64
RFX7Q2KHR2 FP236240.3-201ENST00000623061 327 ntBASIC4.8□□□□□ -1.64
RFX7Q2KHR2 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.8□□□□□ -1.64
RFX7Q2KHR2 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFX7Q2KHR2 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.79□□□□□ -1.64
RFX7Q2KHR2 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms