Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RANP8-201ENST00000444720 713 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.35□□□□□ -2.03
HSPG2P98160 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC2.35□□□□□ -2.03
HSPG2P98160 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.35□□□□□ -2.03
HSPG2P98160 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.35□□□□□ -2.03
HSPG2P98160 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 ANKRD20A10P-201ENST00000457591 1515 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC2.35□□□□□ -2.03
HSPG2P98160 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HSPG2P98160 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC2.35□□□□□ -2.03
HSPG2P98160 HMGN1P11-201ENST00000508668 303 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 RN7SKP18-201ENST00000516005 275 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 AC244258.1-201ENST00000637553 1071 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC2.35□□□□□ -2.03
HSPG2P98160 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
HSPG2P98160 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
HSPG2P98160 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 AL133268.1-201ENST00000405676 1401 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.35□□□□□ -2.03
HSPG2P98160 SNORD105B-201ENST00000458770 79 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC2.35□□□□□ -2.03
HSPG2P98160 RNU2-27P-201ENST00000516185 142 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC2.35□□□□□ -2.03
HSPG2P98160 AC005476.1-201ENST00000554427 397 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC2.35□□□□□ -2.03
HSPG2P98160 MIR4472-2-201ENST00000582069 67 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 THAP12P5-201ENST00000405864 2275 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 AP000641.1-201ENST00000531988 1639 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.35□□□□□ -2.03
HSPG2P98160 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
HSPG2P98160 RNA5SP97-201ENST00000365006 84 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.35□□□□□ -2.03
HSPG2P98160 DNAJC19P8-201ENST00000452887 259 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.35□□□□□ -2.03
HSPG2P98160 IGHV3-32-201ENST00000519182 355 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 NELL2-211ENST00000548826 559 ntTSL 2 BASIC2.35□□□□□ -2.03
HSPG2P98160 AL355365.1-201ENST00000616480 294 ntBASIC2.35□□□□□ -2.03
HSPG2P98160 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.35□□□□□ -2.03
HSPG2P98160 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
HSPG2P98160 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC2.34□□□□□ -2.03
HSPG2P98160 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
HSPG2P98160 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
HSPG2P98160 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HSPG2P98160 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
HSPG2P98160 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC2.34□□□□□ -2.03
HSPG2P98160 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.34□□□□□ -2.03
HSPG2P98160 AC005019.1-201ENST00000436455 431 ntBASIC2.34□□□□□ -2.03
HSPG2P98160 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.34□□□□□ -2.03
HSPG2P98160 AC092747.2-201ENST00000545069 983 ntBASIC2.34□□□□□ -2.03
HSPG2P98160 AC011611.1-201ENST00000552179 197 ntBASIC2.34□□□□□ -2.03
HSPG2P98160 AC007599.1-201ENST00000568688 1174 ntBASIC2.34□□□□□ -2.03
HSPG2P98160 AC104984.5-201ENST00000586878 94 ntBASIC2.34□□□□□ -2.03
HSPG2P98160 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.34□□□□□ -2.03
HSPG2P98160 AL606834.2-201ENST00000602954 668 ntBASIC2.34□□□□□ -2.03
HSPG2P98160 AC010591.1-201ENST00000603941 649 ntBASIC2.34□□□□□ -2.03
HSPG2P98160 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC2.34□□□□□ -2.03
HSPG2P98160 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
HSPG2P98160 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HSPG2P98160 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.03
HSPG2P98160 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC2.34□□□□□ -2.03
HSPG2P98160 FTLP6-201ENST00000355274 422 ntBASIC2.34□□□□□ -2.03
HSPG2P98160 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
HSPG2P98160 RNU6-729P-201ENST00000384399 107 ntBASIC2.34□□□□□ -2.03
HSPG2P98160 NPM1P37-201ENST00000403105 874 ntBASIC2.34□□□□□ -2.03
HSPG2P98160 Y_RNA.638-201ENST00000459374 113 ntBASIC2.34□□□□□ -2.03
HSPG2P98160 AC011825.1-201ENST00000484967 388 ntBASIC2.34□□□□□ -2.03
HSPG2P98160 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.34□□□□□ -2.03
HSPG2P98160 PTGES3P3-201ENST00000511479 482 ntBASIC2.34□□□□□ -2.03
HSPG2P98160 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.34□□□□□ -2.03
HSPG2P98160 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
HSPG2P98160 AC138907.10-201ENST00000623708 983 ntBASIC2.34□□□□□ -2.03
HSPG2P98160 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.34□□□□□ -2.03
HSPG2P98160 AP001153.1-201ENST00000641024 338 ntBASIC2.34□□□□□ -2.03
HSPG2P98160 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
HSPG2P98160 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
HSPG2P98160 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC2.34□□□□□ -2.03
HSPG2P98160 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms