Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.18□□□□□ -1.9
CMC4P56277 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.18□□□□□ -1.9
CMC4P56277 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.18□□□□□ -1.9
CMC4P56277 SNORA48.9-201ENST00000516419 162 ntBASIC3.18□□□□□ -1.9
CMC4P56277 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.18□□□□□ -1.9
CMC4P56277 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC3.18□□□□□ -1.9
CMC4P56277 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.18□□□□□ -1.9
CMC4P56277 SMARCE1P4-201ENST00000523647 241 ntBASIC3.18□□□□□ -1.9
CMC4P56277 AC063950.1-201ENST00000552036 308 ntBASIC3.18□□□□□ -1.9
CMC4P56277 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.18□□□□□ -1.9
CMC4P56277 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.18□□□□□ -1.9
CMC4P56277 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.18□□□□□ -1.9
CMC4P56277 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.18□□□□□ -1.9
CMC4P56277 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CMC4P56277 AC068790.4-201ENST00000602474 263 ntBASIC3.18□□□□□ -1.9
CMC4P56277 AC119501.1-201ENST00000603646 475 ntBASIC3.18□□□□□ -1.9
CMC4P56277 AC008745.1-201ENST00000604064 271 ntBASIC3.18□□□□□ -1.9
CMC4P56277 MIR6748-201ENST00000610433 71 ntBASIC3.18□□□□□ -1.9
CMC4P56277 AL121873.1-201ENST00000616013 524 ntBASIC3.18□□□□□ -1.9
CMC4P56277 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.18□□□□□ -1.9
CMC4P56277 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.18□□□□□ -1.9
CMC4P56277 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.18□□□□□ -1.9
CMC4P56277 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.18□□□□□ -1.9
CMC4P56277 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CMC4P56277 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC3.18□□□□□ -1.9
CMC4P56277 AL158163.1-201ENST00000603915 1649 ntBASIC3.18□□□□□ -1.9
CMC4P56277 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
CMC4P56277 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CMC4P56277 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CMC4P56277 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CMC4P56277 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CMC4P56277 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.18□□□□□ -1.9
CMC4P56277 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CMC4P56277 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CMC4P56277 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CMC4P56277 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CMC4P56277 AL592182.3-201ENST00000642132 3304 ntBASIC3.17□□□□□ -1.9
CMC4P56277 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CMC4P56277 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.17□□□□□ -1.9
CMC4P56277 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.17□□□□□ -1.9
CMC4P56277 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CMC4P56277 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CMC4P56277 MIR383-201ENST00000362257 73 ntBASIC3.17□□□□□ -1.9
CMC4P56277 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CMC4P56277 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.17□□□□□ -1.9
CMC4P56277 SNORD66.1-201ENST00000391230 76 ntBASIC3.17□□□□□ -1.9
CMC4P56277 RPS26P8-201ENST00000393490 348 ntBASIC3.17□□□□□ -1.9
CMC4P56277 OR6C69P-201ENST00000394268 893 ntBASIC3.17□□□□□ -1.9
CMC4P56277 VN1R8P-201ENST00000407739 893 ntBASIC3.17□□□□□ -1.9
CMC4P56277 RN7SKP235-201ENST00000410662 305 ntBASIC3.17□□□□□ -1.9
CMC4P56277 COX6CP17-201ENST00000421389 185 ntBASIC3.17□□□□□ -1.9
CMC4P56277 GAPDHP49-201ENST00000421421 961 ntBASIC3.17□□□□□ -1.9
CMC4P56277 AL732292.1-201ENST00000426692 226 ntBASIC3.17□□□□□ -1.9
CMC4P56277 AC073069.1-201ENST00000428657 441 ntBASIC3.17□□□□□ -1.9
CMC4P56277 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.17□□□□□ -1.9
CMC4P56277 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.17□□□□□ -1.9
CMC4P56277 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.17□□□□□ -1.9
CMC4P56277 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.17□□□□□ -1.9
CMC4P56277 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.17□□□□□ -1.9
CMC4P56277 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.17□□□□□ -1.9
CMC4P56277 IFNWP4-201ENST00000453148 294 ntBASIC3.17□□□□□ -1.9
CMC4P56277 RAD23BP3-201ENST00000454157 1152 ntBASIC3.17□□□□□ -1.9
CMC4P56277 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.17□□□□□ -1.9
CMC4P56277 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.17□□□□□ -1.9
CMC4P56277 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.17□□□□□ -1.9
CMC4P56277 RPL7P48-201ENST00000461513 746 ntBASIC3.17□□□□□ -1.9
CMC4P56277 APOOP2-201ENST00000461561 539 ntBASIC3.17□□□□□ -1.9
CMC4P56277 RPL7P1-201ENST00000468161 747 ntBASIC3.17□□□□□ -1.9
CMC4P56277 RPL7P9-201ENST00000468715 747 ntBASIC3.17□□□□□ -1.9
CMC4P56277 AC109327.1-201ENST00000471666 403 ntBASIC3.17□□□□□ -1.9
CMC4P56277 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.17□□□□□ -1.9
CMC4P56277 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.17□□□□□ -1.9
CMC4P56277 AC008958.1-201ENST00000511047 682 ntBASIC3.17□□□□□ -1.9
CMC4P56277 AC099522.1-202ENST00000514718 367 ntBASIC3.17□□□□□ -1.9
CMC4P56277 RNA5SP49-201ENST00000516450 115 ntBASIC3.17□□□□□ -1.9
CMC4P56277 AF186190.1-201ENST00000517470 480 ntBASIC3.17□□□□□ -1.9
CMC4P56277 AC138701.1-201ENST00000524329 714 ntBASIC3.17□□□□□ -1.9
CMC4P56277 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CMC4P56277 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.17□□□□□ -1.9
CMC4P56277 HIGD1AP5-201ENST00000529959 259 ntBASIC3.17□□□□□ -1.9
CMC4P56277 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CMC4P56277 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.17□□□□□ -1.9
CMC4P56277 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CMC4P56277 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.17□□□□□ -1.9
CMC4P56277 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.17□□□□□ -1.9
CMC4P56277 SETP1-201ENST00000556014 845 ntBASIC3.17□□□□□ -1.9
CMC4P56277 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.17□□□□□ -1.9
CMC4P56277 AC110743.1-201ENST00000584870 478 ntBASIC3.17□□□□□ -1.9
CMC4P56277 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.17□□□□□ -1.9
CMC4P56277 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.17□□□□□ -1.9
CMC4P56277 AC005034.4-201ENST00000603612 899 ntBASIC3.17□□□□□ -1.9
CMC4P56277 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.17□□□□□ -1.9
CMC4P56277 AC092653.1-201ENST00000608509 531 ntBASIC3.17□□□□□ -1.9
CMC4P56277 MIR6716-201ENST00000613413 80 ntBASIC3.17□□□□□ -1.9
CMC4P56277 AC114781.5-201ENST00000615297 108 ntBASIC3.17□□□□□ -1.9
CMC4P56277 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.17□□□□□ -1.9
CMC4P56277 MIR8059-201ENST00000620427 81 ntBASIC3.17□□□□□ -1.9
CMC4P56277 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.17□□□□□ -1.9
CMC4P56277 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CMC4P56277 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms