Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 H2AFZP5-201ENST00000446960 382 ntBASIC4.5□□□□□ -1.69
CDH13P55290 OR1H1P-201ENST00000448731 937 ntBASIC4.5□□□□□ -1.69
CDH13P55290 BX248409.1-201ENST00000455497 255 ntBASIC4.5□□□□□ -1.69
CDH13P55290 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH13P55290 AC092905.1-201ENST00000467527 949 ntBASIC4.5□□□□□ -1.69
CDH13P55290 CCDC75P1-201ENST00000469247 791 ntBASIC4.5□□□□□ -1.69
CDH13P55290 RPL7AP6-201ENST00000477943 801 ntBASIC4.5□□□□□ -1.69
CDH13P55290 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH13P55290 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH13P55290 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH13P55290 AC008494.2-201ENST00000514544 370 ntBASIC4.5□□□□□ -1.69
CDH13P55290 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH13P55290 SCARNA1-201ENST00000517138 166 ntBASIC4.5□□□□□ -1.69
CDH13P55290 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH13P55290 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.5□□□□□ -1.69
CDH13P55290 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH13P55290 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH13P55290 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH13P55290 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH13P55290 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH13P55290 AC027455.1-201ENST00000574104 594 ntBASIC4.5□□□□□ -1.69
CDH13P55290 PCNAP1-202ENST00000595299 752 ntBASIC4.5□□□□□ -1.69
CDH13P55290 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH13P55290 AL391358.1-201ENST00000605342 190 ntBASIC4.5□□□□□ -1.69
CDH13P55290 AC008966.2-201ENST00000606157 453 ntBASIC4.5□□□□□ -1.69
CDH13P55290 AC026979.4-201ENST00000606555 645 ntBASIC4.5□□□□□ -1.69
CDH13P55290 AC013468.1-201ENST00000608680 598 ntBASIC4.5□□□□□ -1.69
CDH13P55290 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH13P55290 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH13P55290 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH13P55290 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH13P55290 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CDH13P55290 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH13P55290 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH13P55290 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDH13P55290 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH13P55290 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CDH13P55290 AC135352.1-201ENST00000506173 1418 ntBASIC4.49□□□□□ -1.69
CDH13P55290 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
CDH13P55290 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CDH13P55290 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH13P55290 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH13P55290 RN7SKP115-201ENST00000363177 317 ntBASIC4.49□□□□□ -1.69
CDH13P55290 RN7SKP224-201ENST00000364140 325 ntBASIC4.49□□□□□ -1.69
CDH13P55290 RNA5SP151-201ENST00000365632 117 ntBASIC4.49□□□□□ -1.69
CDH13P55290 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
CDH13P55290 RNU4-34P-201ENST00000410431 124 ntBASIC4.49□□□□□ -1.69
CDH13P55290 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH13P55290 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.49□□□□□ -1.69
CDH13P55290 AC114814.2-201ENST00000419195 485 ntBASIC4.49□□□□□ -1.69
CDH13P55290 TCEA1P2-201ENST00000420496 906 ntBASIC4.49□□□□□ -1.69
CDH13P55290 BX510359.3-201ENST00000422168 306 ntBASIC4.49□□□□□ -1.69
CDH13P55290 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDH13P55290 NRBF2P3-201ENST00000432731 865 ntBASIC4.49□□□□□ -1.69
CDH13P55290 RPS20P1-201ENST00000434853 354 ntBASIC4.49□□□□□ -1.69
CDH13P55290 PSMD10P3-201ENST00000437000 448 ntBASIC4.49□□□□□ -1.69
CDH13P55290 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDH13P55290 HMGB3P9-201ENST00000441799 583 ntBASIC4.49□□□□□ -1.69
CDH13P55290 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.49□□□□□ -1.69
CDH13P55290 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH13P55290 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH13P55290 RPL7AP28-201ENST00000464513 571 ntBASIC4.49□□□□□ -1.69
CDH13P55290 RN7SL177P-201ENST00000476596 299 ntBASIC4.49□□□□□ -1.69
CDH13P55290 MTND6P6-201ENST00000478031 263 ntBASIC4.49□□□□□ -1.69
CDH13P55290 RPS4XP14-201ENST00000493072 781 ntBASIC4.49□□□□□ -1.69
CDH13P55290 IGBP1P5-201ENST00000507524 1000 ntBASIC4.49□□□□□ -1.69
CDH13P55290 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH13P55290 AC006518.2-201ENST00000542513 940 ntBASIC4.49□□□□□ -1.69
CDH13P55290 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH13P55290 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH13P55290 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH13P55290 AC105129.1-201ENST00000560250 297 ntBASIC4.49□□□□□ -1.69
CDH13P55290 AC009117.1-201ENST00000563948 554 ntBASIC4.49□□□□□ -1.69
CDH13P55290 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH13P55290 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.49□□□□□ -1.69
CDH13P55290 MIR4716-201ENST00000579628 84 ntBASIC4.49□□□□□ -1.69
CDH13P55290 AC091178.1-203ENST00000584586 279 ntBASIC4.49□□□□□ -1.69
CDH13P55290 OR1AB1P-201ENST00000585564 761 ntBASIC4.49□□□□□ -1.69
CDH13P55290 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH13P55290 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH13P55290 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH13P55290 AC093673.2-201ENST00000609674 331 ntBASIC4.49□□□□□ -1.69
CDH13P55290 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CDH13P55290 AC018926.3-201ENST00000618841 406 ntBASIC4.49□□□□□ -1.69
CDH13P55290 AC087385.3-201ENST00000620477 187 ntBASIC4.49□□□□□ -1.69
CDH13P55290 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH13P55290 AL590396.4-201ENST00000636779 956 ntBASIC4.49□□□□□ -1.69
CDH13P55290 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
CDH13P55290 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH13P55290 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CDH13P55290 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.49□□□□□ -1.69
CDH13P55290 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.49□□□□□ -1.69
CDH13P55290 AC114546.3-201ENST00000623582 1734 ntBASIC4.49□□□□□ -1.69
CDH13P55290 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.49□□□□□ -1.69
CDH13P55290 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.48□□□□□ -1.69
CDH13P55290 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDH13P55290 CYP1D1P-201ENST00000416662 1433 ntBASIC4.48□□□□□ -1.69
CDH13P55290 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CDH13P55290 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CDH13P55290 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms