Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC090151.1-201ENST00000520784 730 ntBASIC4.74□□□□□ -1.65
VCPP55072 AC090819.1-201ENST00000523800 1111 ntBASIC4.74□□□□□ -1.65
VCPP55072 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.74□□□□□ -1.65
VCPP55072 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
VCPP55072 AC069200.1-201ENST00000609511 323 ntBASIC4.74□□□□□ -1.65
VCPP55072 AL353726.1-201ENST00000614041 1000 ntBASIC4.74□□□□□ -1.65
VCPP55072 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
VCPP55072 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VCPP55072 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VCPP55072 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VCPP55072 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.74□□□□□ -1.65
VCPP55072 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VCPP55072 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
VCPP55072 AL445437.1-201ENST00000623157 3087 ntBASIC4.74□□□□□ -1.65
VCPP55072 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VCPP55072 AC087565.3-202ENST00000642085 1603 ntBASIC4.73□□□□□ -1.65
VCPP55072 SNORA63.1-201ENST00000362493 131 ntBASIC4.73□□□□□ -1.65
VCPP55072 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.73□□□□□ -1.65
VCPP55072 SNORD65-201ENST00000391079 73 ntBASIC4.73□□□□□ -1.65
VCPP55072 OR1F12-201ENST00000402365 945 ntBASIC4.73□□□□□ -1.65
VCPP55072 HDGFP1-201ENST00000405943 252 ntBASIC4.73□□□□□ -1.65
VCPP55072 PDSS1P1-201ENST00000422953 1114 ntBASIC4.73□□□□□ -1.65
VCPP55072 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.73□□□□□ -1.65
VCPP55072 AC011998.1-201ENST00000433403 117 ntBASIC4.73□□□□□ -1.65
VCPP55072 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.73□□□□□ -1.65
VCPP55072 AL157884.3-201ENST00000448273 1184 ntBASIC4.73□□□□□ -1.65
VCPP55072 RPL31P20-201ENST00000449593 360 ntBASIC4.73□□□□□ -1.65
VCPP55072 AL162388.1-201ENST00000450912 352 ntBASIC4.73□□□□□ -1.65
VCPP55072 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.73□□□□□ -1.65
VCPP55072 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.73□□□□□ -1.65
VCPP55072 RN7SL98P-201ENST00000462271 300 ntBASIC4.73□□□□□ -1.65
VCPP55072 AC041039.1-201ENST00000485656 536 ntBASIC4.73□□□□□ -1.65
VCPP55072 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VCPP55072 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VCPP55072 SEC11B-201ENST00000518383 499 ntBASIC4.73□□□□□ -1.65
VCPP55072 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.73□□□□□ -1.65
VCPP55072 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.73□□□□□ -1.65
VCPP55072 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.73□□□□□ -1.65
VCPP55072 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.73□□□□□ -1.65
VCPP55072 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VCPP55072 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.73□□□□□ -1.65
VCPP55072 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.73□□□□□ -1.65
VCPP55072 RN7SL339P-201ENST00000580597 296 ntBASIC4.73□□□□□ -1.65
VCPP55072 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.73□□□□□ -1.65
VCPP55072 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.73□□□□□ -1.65
VCPP55072 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VCPP55072 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.73□□□□□ -1.65
VCPP55072 BX322635.1-201ENST00000605804 496 ntBASIC4.73□□□□□ -1.65
VCPP55072 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.73□□□□□ -1.65
VCPP55072 AC104820.1-201ENST00000624183 307 ntBASIC4.73□□□□□ -1.65
VCPP55072 AC090506.2-201ENST00000624521 419 ntBASIC4.73□□□□□ -1.65
VCPP55072 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.73□□□□□ -1.65
VCPP55072 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
VCPP55072 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VCPP55072 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
VCPP55072 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VCPP55072 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
VCPP55072 AC125257.1-201ENST00000560400 2930 ntBASIC4.72□□□□□ -1.65
VCPP55072 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VCPP55072 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VCPP55072 MIR7-1-201ENST00000384871 110 ntBASIC4.72□□□□□ -1.65
VCPP55072 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VCPP55072 FCF1P5-201ENST00000406490 482 ntBASIC4.72□□□□□ -1.65
VCPP55072 RPL7P2-201ENST00000427639 268 ntBASIC4.72□□□□□ -1.65
VCPP55072 AL117339.2-201ENST00000430475 180 ntBASIC4.72□□□□□ -1.65
VCPP55072 RPL37P1-201ENST00000432310 284 ntBASIC4.72□□□□□ -1.65
VCPP55072 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.72□□□□□ -1.65
VCPP55072 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.72□□□□□ -1.65
VCPP55072 RRM2P4-201ENST00000441721 562 ntBASIC4.72□□□□□ -1.65
VCPP55072 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.72□□□□□ -1.65
VCPP55072 AC091959.2-201ENST00000477363 321 ntBASIC4.72□□□□□ -1.65
VCPP55072 AC090013.1-201ENST00000485147 480 ntBASIC4.72□□□□□ -1.65
VCPP55072 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.72□□□□□ -1.65
VCPP55072 PARP4P3-201ENST00000510265 317 ntBASIC4.72□□□□□ -1.65
VCPP55072 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.72□□□□□ -1.65
VCPP55072 AC104997.1-201ENST00000519761 717 ntBASIC4.72□□□□□ -1.65
VCPP55072 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.72□□□□□ -1.65
VCPP55072 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.72□□□□□ -1.65
VCPP55072 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.72□□□□□ -1.65
VCPP55072 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VCPP55072 HNRNPCP4-201ENST00000571636 900 ntBASIC4.72□□□□□ -1.65
VCPP55072 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.72□□□□□ -1.65
VCPP55072 ADAD1P2-201ENST00000588476 646 ntBASIC4.72□□□□□ -1.65
VCPP55072 BMS1P7-201ENST00000602440 1052 ntBASIC4.72□□□□□ -1.65
VCPP55072 AC008739.3-201ENST00000603262 127 ntBASIC4.72□□□□□ -1.65
VCPP55072 AP002360.3-201ENST00000607673 710 ntBASIC4.72□□□□□ -1.65
VCPP55072 AC020634.1-201ENST00000608701 549 ntBASIC4.72□□□□□ -1.65
VCPP55072 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.72□□□□□ -1.65
VCPP55072 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.72□□□□□ -1.65
VCPP55072 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
VCPP55072 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
VCPP55072 AC091905.2-201ENST00000623143 306 ntBASIC4.72□□□□□ -1.65
VCPP55072 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VCPP55072 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VCPP55072 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.72□□□□□ -1.65
VCPP55072 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
VCPP55072 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VCPP55072 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VCPP55072 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.72□□□□□ -1.65
VCPP55072 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms