Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LINC01355-201ENST00000566551 5444 ntBASIC4.47□□□□□ -1.69
PDX1P52945 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.46□□□□□ -1.69
PDX1P52945 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.46□□□□□ -1.69
PDX1P52945 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PDX1P52945 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
PDX1P52945 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDX1P52945 AC083843.3-201ENST00000623679 2186 ntBASIC4.46□□□□□ -1.7
PDX1P52945 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.46□□□□□ -1.7
PDX1P52945 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.46□□□□□ -1.7
PDX1P52945 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
PDX1P52945 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PDX1P52945 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PDX1P52945 SNORA62.2-201ENST00000364672 152 ntBASIC4.46□□□□□ -1.7
PDX1P52945 SNORA71.2-201ENST00000364941 134 ntBASIC4.46□□□□□ -1.7
PDX1P52945 AC234772.1-201ENST00000377927 937 ntBASIC4.46□□□□□ -1.7
PDX1P52945 RNU6-98P-201ENST00000384173 107 ntBASIC4.46□□□□□ -1.7
PDX1P52945 OR6C69P-201ENST00000394268 893 ntBASIC4.46□□□□□ -1.7
PDX1P52945 AL359643.1-201ENST00000404109 423 ntBASIC4.46□□□□□ -1.7
PDX1P52945 SETP15-201ENST00000412724 337 ntBASIC4.46□□□□□ -1.7
PDX1P52945 OR13Z1P-201ENST00000416141 834 ntBASIC4.46□□□□□ -1.7
PDX1P52945 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.46□□□□□ -1.7
PDX1P52945 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.46□□□□□ -1.7
PDX1P52945 FTH1P16-201ENST00000435241 552 ntBASIC4.46□□□□□ -1.7
PDX1P52945 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.46□□□□□ -1.7
PDX1P52945 FABP5P3-201ENST00000437960 408 ntBASIC4.46□□□□□ -1.7
PDX1P52945 AC000041.1-201ENST00000439655 175 ntBASIC4.46□□□□□ -1.7
PDX1P52945 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.46□□□□□ -1.7
PDX1P52945 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.46□□□□□ -1.7
PDX1P52945 ARL5AP2-201ENST00000444698 533 ntBASIC4.46□□□□□ -1.7
PDX1P52945 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.46□□□□□ -1.7
PDX1P52945 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.46□□□□□ -1.7
PDX1P52945 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.46□□□□□ -1.7
PDX1P52945 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.46□□□□□ -1.7
PDX1P52945 SUMO2P5-201ENST00000506790 245 ntBASIC4.46□□□□□ -1.7
PDX1P52945 AC026402.1-201ENST00000513642 170 ntBASIC4.46□□□□□ -1.7
PDX1P52945 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.46□□□□□ -1.7
PDX1P52945 AC134698.5-201ENST00000519444 336 ntBASIC4.46□□□□□ -1.7
PDX1P52945 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.46□□□□□ -1.7
PDX1P52945 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.46□□□□□ -1.7
PDX1P52945 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.46□□□□□ -1.7
PDX1P52945 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.46□□□□□ -1.7
PDX1P52945 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.46□□□□□ -1.7
PDX1P52945 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.46□□□□□ -1.7
PDX1P52945 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.46□□□□□ -1.7
PDX1P52945 AL020997.2-201ENST00000602607 184 ntBASIC4.46□□□□□ -1.7
PDX1P52945 AC096947.1-201ENST00000603233 470 ntBASIC4.46□□□□□ -1.7
PDX1P52945 AL109618.2-201ENST00000605527 211 ntBASIC4.46□□□□□ -1.7
PDX1P52945 AC090948.1-201ENST00000607464 549 ntBASIC4.46□□□□□ -1.7
PDX1P52945 OR7A19P-201ENST00000608051 733 ntBASIC4.46□□□□□ -1.7
PDX1P52945 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.46□□□□□ -1.7
PDX1P52945 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.46□□□□□ -1.7
PDX1P52945 AC124016.2-201ENST00000610058 665 ntBASIC4.46□□□□□ -1.7
PDX1P52945 AL133243.1-201ENST00000614487 366 ntBASIC4.46□□□□□ -1.7
PDX1P52945 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.46□□□□□ -1.7
PDX1P52945 uc_338.9-201ENST00000617424 182 ntBASIC4.46□□□□□ -1.7
PDX1P52945 AC073569.3-201ENST00000619055 682 ntBASIC4.46□□□□□ -1.7
PDX1P52945 AC022960.3-201ENST00000619794 441 ntBASIC4.46□□□□□ -1.7
PDX1P52945 AC090772.4-201ENST00000623599 362 ntBASIC4.46□□□□□ -1.7
PDX1P52945 AP003485.1-201ENST00000625093 753 ntBASIC4.46□□□□□ -1.7
PDX1P52945 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.46□□□□□ -1.7
PDX1P52945 OR4G3P-201ENST00000633500 913 ntBASIC4.46□□□□□ -1.7
PDX1P52945 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDX1P52945 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PDX1P52945 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PDX1P52945 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.46□□□□□ -1.7
PDX1P52945 MFSD8-220ENST00000641243 1422 ntBASIC4.46□□□□□ -1.7
PDX1P52945 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PDX1P52945 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.46□□□□□ -1.7
PDX1P52945 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDX1P52945 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.45□□□□□ -1.7
PDX1P52945 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDX1P52945 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PDX1P52945 AL359922.3-201ENST00000624779 1670 ntBASIC4.45□□□□□ -1.7
PDX1P52945 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDX1P52945 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.45□□□□□ -1.7
PDX1P52945 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.45□□□□□ -1.7
PDX1P52945 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PDX1P52945 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PDX1P52945 RNU6-543P-201ENST00000362576 108 ntBASIC4.45□□□□□ -1.7
PDX1P52945 RNA5SP27-201ENST00000363839 119 ntBASIC4.45□□□□□ -1.7
PDX1P52945 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.45□□□□□ -1.7
PDX1P52945 RNU6-225P-201ENST00000384613 103 ntBASIC4.45□□□□□ -1.7
PDX1P52945 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PDX1P52945 AC233289.1-201ENST00000403700 508 ntBASIC4.45□□□□□ -1.7
PDX1P52945 ARL4AP5-201ENST00000404372 599 ntBASIC4.45□□□□□ -1.7
PDX1P52945 AP000580.1-201ENST00000404439 358 ntBASIC4.45□□□□□ -1.7
PDX1P52945 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PDX1P52945 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.45□□□□□ -1.7
PDX1P52945 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.45□□□□□ -1.7
PDX1P52945 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.45□□□□□ -1.7
PDX1P52945 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.45□□□□□ -1.7
PDX1P52945 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.45□□□□□ -1.7
PDX1P52945 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.45□□□□□ -1.7
PDX1P52945 EIF4A1P1-201ENST00000420241 934 ntBASIC4.45□□□□□ -1.7
PDX1P52945 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.45□□□□□ -1.7
PDX1P52945 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PDX1P52945 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.45□□□□□ -1.7
PDX1P52945 NMNAT1P2-201ENST00000435192 860 ntBASIC4.45□□□□□ -1.7
PDX1P52945 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.45□□□□□ -1.7
PDX1P52945 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms