Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC011998.1-201ENST00000433403 117 ntBASIC3.78□□□□□ -1.8
CX3CR1P49238 GSTA7P-201ENST00000438425 448 ntBASIC3.78□□□□□ -1.8
CX3CR1P49238 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CX3CR1P49238 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.78□□□□□ -1.8
CX3CR1P49238 PPM1AP1-201ENST00000502740 1135 ntBASIC3.78□□□□□ -1.8
CX3CR1P49238 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.78□□□□□ -1.8
CX3CR1P49238 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.78□□□□□ -1.8
CX3CR1P49238 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.78□□□□□ -1.8
CX3CR1P49238 IGLVIV-65-201ENST00000517313 360 ntBASIC3.78□□□□□ -1.8
CX3CR1P49238 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.78□□□□□ -1.8
CX3CR1P49238 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.78□□□□□ -1.8
CX3CR1P49238 AC022790.1-201ENST00000522872 204 ntBASIC3.78□□□□□ -1.8
CX3CR1P49238 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CX3CR1P49238 AP006289.1-201ENST00000538089 277 ntBASIC3.78□□□□□ -1.8
CX3CR1P49238 AL161713.1-201ENST00000555538 145 ntBASIC3.78□□□□□ -1.8
CX3CR1P49238 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CX3CR1P49238 AC068790.5-201ENST00000602741 355 ntBASIC3.78□□□□□ -1.8
CX3CR1P49238 MTCO3P22-201ENST00000603219 784 ntBASIC3.78□□□□□ -1.8
CX3CR1P49238 AC115286.1-201ENST00000604298 434 ntBASIC3.78□□□□□ -1.8
CX3CR1P49238 AC024940.4-201ENST00000605507 246 ntBASIC3.78□□□□□ -1.8
CX3CR1P49238 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.78□□□□□ -1.8
CX3CR1P49238 AC012409.3-201ENST00000611343 981 ntBASIC3.78□□□□□ -1.8
CX3CR1P49238 Mico1.1-201ENST00000611698 204 ntBASIC3.78□□□□□ -1.8
CX3CR1P49238 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CX3CR1P49238 AL021997.2-201ENST00000615674 271 ntBASIC3.78□□□□□ -1.8
CX3CR1P49238 AC233309.1-201ENST00000619522 751 ntBASIC3.78□□□□□ -1.8
CX3CR1P49238 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.78□□□□□ -1.8
CX3CR1P49238 AC009452.1-201ENST00000640823 606 ntBASIC3.78□□□□□ -1.8
CX3CR1P49238 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CX3CR1P49238 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
CX3CR1P49238 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CX3CR1P49238 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CX3CR1P49238 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
CX3CR1P49238 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CR1P49238 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CR1P49238 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CR1P49238 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CR1P49238 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.77□□□□□ -1.81
CX3CR1P49238 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CR1P49238 RPS16P5-201ENST00000406501 404 ntBASIC3.77□□□□□ -1.81
CX3CR1P49238 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.77□□□□□ -1.81
CX3CR1P49238 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.77□□□□□ -1.81
CX3CR1P49238 EIF1P3-201ENST00000423841 334 ntBASIC3.77□□□□□ -1.81
CX3CR1P49238 RPEP3-201ENST00000425462 676 ntBASIC3.77□□□□□ -1.81
CX3CR1P49238 FTH1P16-201ENST00000435241 552 ntBASIC3.77□□□□□ -1.81
CX3CR1P49238 RPS26P15-201ENST00000488067 348 ntBASIC3.77□□□□□ -1.81
CX3CR1P49238 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.77□□□□□ -1.81
CX3CR1P49238 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.77□□□□□ -1.81
CX3CR1P49238 AC108145.1-201ENST00000503770 153 ntBASIC3.77□□□□□ -1.81
CX3CR1P49238 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.77□□□□□ -1.81
CX3CR1P49238 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.77□□□□□ -1.81
CX3CR1P49238 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
CX3CR1P49238 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.77□□□□□ -1.81
CX3CR1P49238 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CR1P49238 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.77□□□□□ -1.81
CX3CR1P49238 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.77□□□□□ -1.81
CX3CR1P49238 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.77□□□□□ -1.81
CX3CR1P49238 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.77□□□□□ -1.81
CX3CR1P49238 ZNF92P3-201ENST00000596594 954 ntBASIC3.77□□□□□ -1.81
CX3CR1P49238 AC008536.1-201ENST00000602872 669 ntBASIC3.77□□□□□ -1.81
CX3CR1P49238 AL121873.1-201ENST00000616013 524 ntBASIC3.77□□□□□ -1.81
CX3CR1P49238 AC007546.1-201ENST00000619452 559 ntBASIC3.77□□□□□ -1.81
CX3CR1P49238 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CR1P49238 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CR1P49238 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.77□□□□□ -1.81
CX3CR1P49238 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CR1P49238 USP9YP4-201ENST00000424401 1745 ntBASIC3.77□□□□□ -1.81
CX3CR1P49238 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CR1P49238 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.77□□□□□ -1.81
CX3CR1P49238 MFSD8-220ENST00000641243 1422 ntBASIC3.77□□□□□ -1.81
CX3CR1P49238 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.77□□□□□ -1.81
CX3CR1P49238 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CX3CR1P49238 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
CX3CR1P49238 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CX3CR1P49238 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CR1P49238 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CR1P49238 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.76□□□□□ -1.81
CX3CR1P49238 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CR1P49238 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CR1P49238 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CR1P49238 OR5P1P-201ENST00000299512 925 ntBASIC3.76□□□□□ -1.81
CX3CR1P49238 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CR1P49238 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
CX3CR1P49238 RNU4-31P-201ENST00000384211 141 ntBASIC3.76□□□□□ -1.81
CX3CR1P49238 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CX3CR1P49238 AL035696.2-201ENST00000407941 709 ntBASIC3.76□□□□□ -1.81
CX3CR1P49238 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CX3CR1P49238 LINC01881-201ENST00000416103 412 ntBASIC3.76□□□□□ -1.81
CX3CR1P49238 AL139095.3-201ENST00000419672 1203 ntBASIC3.76□□□□□ -1.81
CX3CR1P49238 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.76□□□□□ -1.81
CX3CR1P49238 ELOCP11-201ENST00000436690 332 ntBASIC3.76□□□□□ -1.81
CX3CR1P49238 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.76□□□□□ -1.81
CX3CR1P49238 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.76□□□□□ -1.81
CX3CR1P49238 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.76□□□□□ -1.81
CX3CR1P49238 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CX3CR1P49238 ELOCP16-201ENST00000444494 332 ntBASIC3.76□□□□□ -1.81
CX3CR1P49238 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.76□□□□□ -1.81
CX3CR1P49238 AL513533.1-201ENST00000453728 415 ntBASIC3.76□□□□□ -1.81
CX3CR1P49238 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.76□□□□□ -1.81
CX3CR1P49238 RPL23AP72-201ENST00000492447 435 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms