Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.86□□□□□ -1.63
HOXC13P31276 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC13P31276 SNORA76.2-201ENST00000517095 137 ntBASIC4.86□□□□□ -1.63
HOXC13P31276 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC13P31276 COX6B1P6-201ENST00000522347 255 ntBASIC4.86□□□□□ -1.63
HOXC13P31276 CIR1P1-201ENST00000524055 1133 ntBASIC4.86□□□□□ -1.63
HOXC13P31276 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC13P31276 AP001781.1-201ENST00000530977 207 ntBASIC4.86□□□□□ -1.63
HOXC13P31276 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC13P31276 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC13P31276 MIR4472-2-201ENST00000582069 67 ntBASIC4.86□□□□□ -1.63
HOXC13P31276 MIR3138-201ENST00000585238 82 ntBASIC4.86□□□□□ -1.63
HOXC13P31276 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC13P31276 AC015804.1-201ENST00000622935 435 ntBASIC4.86□□□□□ -1.63
HOXC13P31276 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC13P31276 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
HOXC13P31276 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC13P31276 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC13P31276 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
HOXC13P31276 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HOXC13P31276 ZNF33CP-201ENST00000432492 2030 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC13P31276 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HOXC13P31276 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC13P31276 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC13P31276 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HOXC13P31276 RNU6-650P-201ENST00000365658 111 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC13P31276 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC13P31276 MIR124-3-201ENST00000384866 87 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 RPL31P45-201ENST00000419532 356 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC13P31276 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC13P31276 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC13P31276 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC13P31276 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC13P31276 MTND2P39-201ENST00000457230 764 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 AC109327.1-201ENST00000471666 403 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC13P31276 RPL36AP41-201ENST00000493820 306 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 PPM1AP1-201ENST00000502740 1135 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 AC010374.1-201ENST00000503762 1237 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC13P31276 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC13P31276 SLC25A15P5-201ENST00000508033 253 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC13P31276 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC13P31276 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC13P31276 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC13P31276 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC13P31276 OSBPL9P3-201ENST00000534523 595 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC13P31276 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC13P31276 AL121594.4-201ENST00000556211 1196 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC13P31276 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC13P31276 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.85□□□□□ -1.63
HOXC13P31276 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC13P31276 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC13P31276 MIR8069-1-201ENST00000616627 86 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 AL121890.3-201ENST00000618494 516 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.85□□□□□ -1.63
HOXC13P31276 MIR8069-2-201ENST00000621412 86 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 AC004232.3-201ENST00000622977 525 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 AC004943.3-201ENST00000624116 600 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 AL049536.1-201ENST00000625043 744 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 FRG1DP-201ENST00000635586 771 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 AL122126.1-201ENST00000546905 1318 ntBASIC4.85□□□□□ -1.63
HOXC13P31276 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.85□□□□□ -1.63
HOXC13P31276 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
HOXC13P31276 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC13P31276 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HOXC13P31276 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC13P31276 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HOXC13P31276 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HOXC13P31276 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC13P31276 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HOXC13P31276 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC13P31276 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXC13P31276 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC13P31276 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC13P31276 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HOXC13P31276 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HOXC13P31276 MIR659-201ENST00000384963 97 ntBASIC4.84□□□□□ -1.63
HOXC13P31276 MIR134-201ENST00000385258 73 ntBASIC4.84□□□□□ -1.63
HOXC13P31276 AL592291.1-201ENST00000403830 352 ntBASIC4.84□□□□□ -1.63
HOXC13P31276 RN7SKP267-201ENST00000410381 285 ntBASIC4.84□□□□□ -1.63
HOXC13P31276 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.84□□□□□ -1.63
HOXC13P31276 AL121882.1-201ENST00000422893 417 ntBASIC4.84□□□□□ -1.63
HOXC13P31276 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXC13P31276 AC008065.1-201ENST00000428525 348 ntBASIC4.84□□□□□ -1.63
HOXC13P31276 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.84□□□□□ -1.63
HOXC13P31276 AC097499.1-201ENST00000444277 208 ntBASIC4.84□□□□□ -1.63
HOXC13P31276 AL935212.3-201ENST00000450729 284 ntBASIC4.84□□□□□ -1.63
HOXC13P31276 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXC13P31276 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXC13P31276 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.84□□□□□ -1.63
HOXC13P31276 RPL23AP71-201ENST00000470966 469 ntBASIC4.84□□□□□ -1.63
HOXC13P31276 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms