Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MRPS33P3-201ENST00000513456 322 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 AC118465.1-201ENST00000513820 1271 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 RNU6-1225P-201ENST00000516336 65 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 AC012400.1-201ENST00000518452 381 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 AC091515.1-201ENST00000548110 679 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 AL390838.2-201ENST00000602394 274 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 AC018638.7-201ENST00000605836 1114 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 AL161616.1-201ENST00000611867 286 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CNGA1P29973 AC090017.1-201ENST00000548612 1779 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CNGA1P29973 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
CNGA1P29973 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CNGA1P29973 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
CNGA1P29973 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.97□□□□□ -1.45
CNGA1P29973 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CNGA1P29973 AC015813.6-201ENST00000624409 5808 ntBASIC5.97□□□□□ -1.45
CNGA1P29973 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CNGA1P29973 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CNGA1P29973 AC092747.4-201ENST00000620519 1861 ntBASIC5.96□□□□□ -1.45
CNGA1P29973 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CNGA1P29973 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.45
CNGA1P29973 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CNGA1P29973 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.96□□□□□ -1.45
CNGA1P29973 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CNGA1P29973 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CNGA1P29973 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.96□□□□□ -1.46
CNGA1P29973 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
CNGA1P29973 GVINP1-202ENST00000531871 7271 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
CNGA1P29973 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
CNGA1P29973 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CNGA1P29973 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CNGA1P29973 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.96□□□□□ -1.46
CNGA1P29973 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CNGA1P29973 RNU6-1300P-201ENST00000391046 108 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 AL078599.1-201ENST00000402075 293 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 AL356131.1-201ENST00000405826 414 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 AC002524.1-201ENST00000411687 547 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 AC009302.1-201ENST00000417147 390 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CNGA1P29973 AL139421.1-201ENST00000423010 169 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.96□□□□□ -1.46
CNGA1P29973 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.96□□□□□ -1.46
CNGA1P29973 MGAT2P2-201ENST00000427194 797 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 C4BPAP2-201ENST00000428434 478 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.96□□□□□ -1.46
CNGA1P29973 ATP5F1P1-201ENST00000433775 569 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.96□□□□□ -1.46
CNGA1P29973 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.96□□□□□ -1.46
CNGA1P29973 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.96□□□□□ -1.46
CNGA1P29973 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.96□□□□□ -1.46
CNGA1P29973 AL034418.1-201ENST00000448675 860 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 NDUFA12P1-201ENST00000455914 406 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.96□□□□□ -1.46
CNGA1P29973 RN7SL197P-201ENST00000466981 299 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.96□□□□□ -1.46
CNGA1P29973 RPL5P22-201ENST00000480199 884 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 AC058823.1-201ENST00000485315 474 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 HMGN2P25-201ENST00000486956 268 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.96□□□□□ -1.46
CNGA1P29973 AC073358.1-201ENST00000505671 684 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 OR5H4P-201ENST00000510851 923 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 AC079395.1-201ENST00000510981 262 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 OR7H2P-201ENST00000513483 306 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.96□□□□□ -1.46
CNGA1P29973 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.96□□□□□ -1.46
CNGA1P29973 AL132657.2-201ENST00000564417 358 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.96□□□□□ -1.46
CNGA1P29973 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.96□□□□□ -1.46
CNGA1P29973 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.96□□□□□ -1.46
CNGA1P29973 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.96□□□□□ -1.46
CNGA1P29973 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.96□□□□□ -1.46
CNGA1P29973 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.96□□□□□ -1.46
CNGA1P29973 AL133507.1-201ENST00000605269 557 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 AC100847.1-201ENST00000611316 481 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 AC116447.1-201ENST00000613153 453 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 AC123768.4-201ENST00000616244 701 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 AC121761.2-201ENST00000617300 689 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 MIR7641-1-201ENST00000627518 61 ntBASIC5.96□□□□□ -1.46
CNGA1P29973 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.96□□□□□ -1.46
CNGA1P29973 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CNGA1P29973 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CNGA1P29973 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.96□□□□□ -1.46
CNGA1P29973 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
CNGA1P29973 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.96□□□□□ -1.46
CNGA1P29973 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CNGA1P29973 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CNGA1P29973 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
CNGA1P29973 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CNGA1P29973 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.95□□□□□ -1.46
CNGA1P29973 AP001029.2-203ENST00000589795 4910 ntBASIC5.95□□□□□ -1.46
CNGA1P29973 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CNGA1P29973 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CNGA1P29973 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CNGA1P29973 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.95□□□□□ -1.46
CNGA1P29973 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CNGA1P29973 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.95□□□□□ -1.46
CNGA1P29973 AL118496.1-201ENST00000440201 1812 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms