Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC016582.3-206ENST00000636547 207 ntBASIC5.7□□□□□ -1.5
VAMP1P23763 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
VAMP1P23763 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.7□□□□□ -1.5
VAMP1P23763 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
VAMP1P23763 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VAMP1P23763 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VAMP1P23763 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VAMP1P23763 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VAMP1P23763 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.7□□□□□ -1.5
VAMP1P23763 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
VAMP1P23763 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
VAMP1P23763 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
VAMP1P23763 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.69□□□□□ -1.5
VAMP1P23763 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP1P23763 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
VAMP1P23763 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP1P23763 RNA5SP448-201ENST00000363151 111 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 RNU6-1097P-201ENST00000363586 107 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VAMP1P23763 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP1P23763 Y_RNA.548-201ENST00000384656 105 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP1P23763 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.69□□□□□ -1.5
VAMP1P23763 RNU4-34P-201ENST00000410431 124 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP1P23763 RPL23AP34-201ENST00000423483 410 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 FABP7P1-201ENST00000424004 391 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.69□□□□□ -1.5
VAMP1P23763 MTCO1P20-201ENST00000425366 358 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 AC245884.2-201ENST00000426257 404 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP1P23763 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP1P23763 AC122718.1-201ENST00000439448 744 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 MTATP6P23-201ENST00000440153 476 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 BNIP3P2-201ENST00000441221 577 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP1P23763 CRYGGP-201ENST00000443337 145 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 RPS7P4-201ENST00000444127 582 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP1P23763 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP1P23763 DBIL5P-202ENST00000453414 250 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 FAM133DP-201ENST00000464802 691 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 RN7SL798P-201ENST00000468562 301 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 RN7SL368P-201ENST00000473384 277 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 RPL38P3-201ENST00000484463 213 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 RPS3AP50-201ENST00000487064 803 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 RN7SL101P-201ENST00000496350 279 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.69□□□□□ -1.5
VAMP1P23763 TMEM248P1-201ENST00000510579 951 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 RNA5SP278-201ENST00000517055 102 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.69□□□□□ -1.5
VAMP1P23763 MTND1P35-201ENST00000526739 508 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 GLYATL1P4-201ENST00000529326 906 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP1P23763 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP1P23763 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.69□□□□□ -1.5
VAMP1P23763 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.69□□□□□ -1.5
VAMP1P23763 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP1P23763 AC091304.4-201ENST00000565703 620 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP1P23763 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP1P23763 AC012146.2-201ENST00000576545 416 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 OR4K8P-201ENST00000578842 1048 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP1P23763 GLYATL1P2-202ENST00000588046 902 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 RPL26P30-202ENST00000602923 645 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 AC108451.2-201ENST00000603875 538 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 AC067959.1-201ENST00000604334 379 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC5.69□□□□□ -1.5
VAMP1P23763 AC090948.1-201ENST00000607464 549 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.69□□□□□ -1.5
VAMP1P23763 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC5.69□□□□□ -1.5
VAMP1P23763 AC126175.1-201ENST00000617041 758 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 AC068234.2-201ENST00000619646 522 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 AC078909.2-201ENST00000620584 398 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 AC099494.2-201ENST00000623371 978 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.69□□□□□ -1.5
VAMP1P23763 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.69□□□□□ -1.5
VAMP1P23763 AL121936.2-201ENST00000641935 662 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP1P23763 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP1P23763 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.69□□□□□ -1.5
VAMP1P23763 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP1P23763 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VAMP1P23763 AL138713.1-201ENST00000624026 2130 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.69□□□□□ -1.5
VAMP1P23763 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP1P23763 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP1P23763 AC108751.5-201ENST00000492880 1336 ntBASIC5.69□□□□□ -1.5
VAMP1P23763 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
VAMP1P23763 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.69□□□□□ -1.5
VAMP1P23763 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP1P23763 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VAMP1P23763 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
VAMP1P23763 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.69□□□□□ -1.5
VAMP1P23763 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
VAMP1P23763 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VAMP1P23763 AP002512.4-202ENST00000641599 4530 ntBASIC5.68□□□□□ -1.5
VAMP1P23763 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VAMP1P23763 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms