Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AP005431.1-201ENST00000618479 319 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
TNFSF4P23510 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF4P23510 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF4P23510 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF4P23510 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TNFSF4P23510 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF4P23510 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF4P23510 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TNFSF4P23510 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.83□□□□□ -1.64
TNFSF4P23510 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF4P23510 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF4P23510 Z73965.1-201ENST00000623412 2297 ntBASIC4.83□□□□□ -1.64
TNFSF4P23510 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.82□□□□□ -1.64
TNFSF4P23510 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.82□□□□□ -1.64
TNFSF4P23510 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TNFSF4P23510 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TNFSF4P23510 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF4P23510 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TNFSF4P23510 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF4P23510 GDI2P1-201ENST00000429312 1336 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF4P23510 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
TNFSF4P23510 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF4P23510 RN7SKP292-201ENST00000365522 317 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.82□□□□□ -1.64
TNFSF4P23510 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.82□□□□□ -1.64
TNFSF4P23510 AC093155.2-201ENST00000420734 937 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.82□□□□□ -1.64
TNFSF4P23510 AL953862.1-201ENST00000423016 168 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 OR51AB1P-201ENST00000429046 620 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.82□□□□□ -1.64
TNFSF4P23510 KCTD10P1-201ENST00000434203 625 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 AC090018.1-201ENST00000434369 367 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.82□□□□□ -1.64
TNFSF4P23510 AC002504.1-201ENST00000438281 691 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.82□□□□□ -1.64
TNFSF4P23510 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.82□□□□□ -1.64
TNFSF4P23510 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.82□□□□□ -1.64
TNFSF4P23510 RNU7-125P-201ENST00000458760 62 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 AC097493.1-201ENST00000463958 372 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 AC021193.1-201ENST00000511607 420 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.82□□□□□ -1.64
TNFSF4P23510 RNU6-232P-201ENST00000517144 64 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.82□□□□□ -1.64
TNFSF4P23510 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.82□□□□□ -1.64
TNFSF4P23510 OR5BC1P-201ENST00000529327 739 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.82□□□□□ -1.64
TNFSF4P23510 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.82□□□□□ -1.64
TNFSF4P23510 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF4P23510 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
TNFSF4P23510 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.82□□□□□ -1.64
TNFSF4P23510 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.82□□□□□ -1.64
TNFSF4P23510 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.82□□□□□ -1.64
TNFSF4P23510 AP000811.1-201ENST00000603803 651 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 DUXAP11-201ENST00000603858 526 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 BNIP3P11-201ENST00000603878 563 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 AL022394.1-201ENST00000606979 292 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.82□□□□□ -1.64
TNFSF4P23510 AC008115.3-201ENST00000614874 549 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 AC126175.1-201ENST00000617041 758 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.82□□□□□ -1.64
TNFSF4P23510 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TNFSF4P23510 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.82□□□□□ -1.64
TNFSF4P23510 MIR3974-201ENST00000637126 96 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 AC007671.2-201ENST00000637344 619 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 U6.101-201ENST00000637707 76 ntBASIC4.82□□□□□ -1.64
TNFSF4P23510 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TNFSF4P23510 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.82□□□□□ -1.64
TNFSF4P23510 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF4P23510 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF4P23510 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF4P23510 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF4P23510 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.82□□□□□ -1.64
TNFSF4P23510 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.82□□□□□ -1.64
TNFSF4P23510 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
TNFSF4P23510 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
TNFSF4P23510 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF4P23510 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF4P23510 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TNFSF4P23510 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF4P23510 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.81□□□□□ -1.64
TNFSF4P23510 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.81□□□□□ -1.64
TNFSF4P23510 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF4P23510 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 DDX43P2-201ENST00000604753 1354 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF4P23510 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF4P23510 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF4P23510 AC087359.1-201ENST00000508335 1740 ntBASIC4.81□□□□□ -1.64
TNFSF4P23510 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF4P23510 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF4P23510 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TNFSF4P23510 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF4P23510 RNA5SP30-201ENST00000365552 115 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms