Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH3P22223 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.55□□□□□ -1.68
CDH3P22223 AC106734.1-201ENST00000568646 663 ntBASIC4.55□□□□□ -1.68
CDH3P22223 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH3P22223 AC110743.1-201ENST00000584870 478 ntBASIC4.55□□□□□ -1.68
CDH3P22223 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH3P22223 AL049844.2-201ENST00000604280 628 ntBASIC4.55□□□□□ -1.68
CDH3P22223 AP005229.2-201ENST00000609980 697 ntBASIC4.55□□□□□ -1.68
CDH3P22223 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.55□□□□□ -1.68
CDH3P22223 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH3P22223 AC234782.5-201ENST00000617723 324 ntBASIC4.55□□□□□ -1.68
CDH3P22223 AP000346.3-201ENST00000622821 210 ntBASIC4.55□□□□□ -1.68
CDH3P22223 AC000123.2-201ENST00000623124 461 ntBASIC4.55□□□□□ -1.68
CDH3P22223 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH3P22223 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CDH3P22223 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH3P22223 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH3P22223 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH3P22223 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
CDH3P22223 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH3P22223 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH3P22223 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CDH3P22223 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CDH3P22223 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH3P22223 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH3P22223 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH3P22223 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CDH3P22223 SNORA71.2-201ENST00000364941 134 ntBASIC4.54□□□□□ -1.68
CDH3P22223 SNORA56-201ENST00000383966 129 ntBASIC4.54□□□□□ -1.68
CDH3P22223 MIR620-201ENST00000385232 95 ntBASIC4.54□□□□□ -1.68
CDH3P22223 RPL22P22-201ENST00000395439 379 ntBASIC4.54□□□□□ -1.68
CDH3P22223 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CDH3P22223 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH3P22223 Y_RNA.625-201ENST00000411256 107 ntBASIC4.54□□□□□ -1.68
CDH3P22223 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH3P22223 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH3P22223 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.54□□□□□ -1.68
CDH3P22223 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH3P22223 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH3P22223 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH3P22223 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH3P22223 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH3P22223 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH3P22223 RPS6P4-201ENST00000494693 758 ntBASIC4.54□□□□□ -1.68
CDH3P22223 AC005912.1-201ENST00000495392 255 ntBASIC4.54□□□□□ -1.68
CDH3P22223 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH3P22223 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH3P22223 RN7SKP141-201ENST00000516167 338 ntBASIC4.54□□□□□ -1.68
CDH3P22223 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH3P22223 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH3P22223 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH3P22223 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH3P22223 AP000916.1-201ENST00000533869 835 ntBASIC4.54□□□□□ -1.68
CDH3P22223 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.54□□□□□ -1.68
CDH3P22223 AC079075.1-201ENST00000559543 878 ntBASIC4.54□□□□□ -1.68
CDH3P22223 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.54□□□□□ -1.68
CDH3P22223 MIR4512-201ENST00000583257 77 ntBASIC4.54□□□□□ -1.68
CDH3P22223 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH3P22223 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.54□□□□□ -1.68
CDH3P22223 AL391834.2-201ENST00000609982 546 ntBASIC4.54□□□□□ -1.68
CDH3P22223 AC005156.1-201ENST00000613371 573 ntBASIC4.54□□□□□ -1.68
CDH3P22223 AC010435.1-201ENST00000623353 1177 ntBASIC4.54□□□□□ -1.68
CDH3P22223 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH3P22223 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.54□□□□□ -1.68
CDH3P22223 HSPA8P19-201ENST00000505359 1517 ntBASIC4.54□□□□□ -1.68
CDH3P22223 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH3P22223 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH3P22223 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH3P22223 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDH3P22223 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.54□□□□□ -1.68
CDH3P22223 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDH3P22223 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH3P22223 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDH3P22223 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH3P22223 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CDH3P22223 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH3P22223 Z98745.1-201ENST00000402553 494 ntBASIC4.53□□□□□ -1.68
CDH3P22223 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDH3P22223 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH3P22223 AC140479.3-201ENST00000418944 1126 ntBASIC4.53□□□□□ -1.68
CDH3P22223 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH3P22223 ARL2BPP10-201ENST00000446487 531 ntBASIC4.53□□□□□ -1.68
CDH3P22223 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH3P22223 AL121877.1-201ENST00000453704 622 ntBASIC4.53□□□□□ -1.68
CDH3P22223 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH3P22223 FCF1P6-201ENST00000456841 595 ntBASIC4.53□□□□□ -1.68
CDH3P22223 AC008379.1-201ENST00000463655 464 ntBASIC4.53□□□□□ -1.68
CDH3P22223 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDH3P22223 RPL21P47-201ENST00000483696 477 ntBASIC4.53□□□□□ -1.68
CDH3P22223 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.53□□□□□ -1.68
CDH3P22223 AC093801.2-201ENST00000503966 1050 ntBASIC4.53□□□□□ -1.68
CDH3P22223 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH3P22223 VWA8P1-201ENST00000510889 176 ntBASIC4.53□□□□□ -1.68
CDH3P22223 RNU5A-7P-201ENST00000515979 116 ntBASIC4.53□□□□□ -1.68
CDH3P22223 RNA5SP154-201ENST00000516193 111 ntBASIC4.53□□□□□ -1.68
CDH3P22223 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH3P22223 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.53□□□□□ -1.68
CDH3P22223 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.53□□□□□ -1.68
CDH3P22223 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.53□□□□□ -1.68
CDH3P22223 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms