Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL118496.1-201ENST00000440201 1812 ntBASIC4.7□□□□□ -1.66
PDGFRAP16234 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.7□□□□□ -1.66
PDGFRAP16234 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PDGFRAP16234 OR6K3-202ENST00000368146 996 ntBASIC4.7□□□□□ -1.66
PDGFRAP16234 RNU6-98P-201ENST00000384173 107 ntBASIC4.7□□□□□ -1.66
PDGFRAP16234 RNU6-1005P-201ENST00000384519 107 ntBASIC4.7□□□□□ -1.66
PDGFRAP16234 MIR129-1-201ENST00000384972 72 ntBASIC4.7□□□□□ -1.66
PDGFRAP16234 ATP5F1P6-201ENST00000402768 767 ntBASIC4.7□□□□□ -1.66
PDGFRAP16234 VTA1P1-201ENST00000414044 866 ntBASIC4.7□□□□□ -1.66
PDGFRAP16234 AL158050.1-201ENST00000416077 457 ntBASIC4.7□□□□□ -1.66
PDGFRAP16234 AC062016.2-201ENST00000420950 676 ntBASIC4.7□□□□□ -1.66
PDGFRAP16234 AL606495.1-201ENST00000422100 813 ntBASIC4.7□□□□□ -1.66
PDGFRAP16234 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.7□□□□□ -1.66
PDGFRAP16234 AL512661.1-201ENST00000434586 1253 ntBASIC4.7□□□□□ -1.66
PDGFRAP16234 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFRAP16234 RPL7P29-201ENST00000437151 728 ntBASIC4.7□□□□□ -1.66
PDGFRAP16234 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFRAP16234 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFRAP16234 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFRAP16234 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
PDGFRAP16234 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFRAP16234 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PDGFRAP16234 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFRAP16234 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFRAP16234 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.7□□□□□ -1.66
PDGFRAP16234 OR4R2P-201ENST00000530815 597 ntBASIC4.7□□□□□ -1.66
PDGFRAP16234 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFRAP16234 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.7□□□□□ -1.66
PDGFRAP16234 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFRAP16234 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.7□□□□□ -1.66
PDGFRAP16234 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFRAP16234 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.7□□□□□ -1.66
PDGFRAP16234 MIR6715B-201ENST00000637172 77 ntBASIC4.7□□□□□ -1.66
PDGFRAP16234 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
PDGFRAP16234 AL137100.1-201ENST00000556703 1620 ntBASIC4.7□□□□□ -1.66
PDGFRAP16234 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFRAP16234 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.7□□□□□ -1.66
PDGFRAP16234 AC008432.1-201ENST00000615912 1320 ntBASIC4.7□□□□□ -1.66
PDGFRAP16234 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFRAP16234 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDGFRAP16234 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFRAP16234 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PDGFRAP16234 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
PDGFRAP16234 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFRAP16234 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFRAP16234 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PDGFRAP16234 MIR141-201ENST00000384975 95 ntBASIC4.69□□□□□ -1.66
PDGFRAP16234 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.69□□□□□ -1.66
PDGFRAP16234 RPS24P12-201ENST00000402084 394 ntBASIC4.69□□□□□ -1.66
PDGFRAP16234 AL450992.3-201ENST00000413192 568 ntBASIC4.69□□□□□ -1.66
PDGFRAP16234 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.69□□□□□ -1.66
PDGFRAP16234 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFRAP16234 AC002456.2-201ENST00000509356 380 ntBASIC4.69□□□□□ -1.66
PDGFRAP16234 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.69□□□□□ -1.66
PDGFRAP16234 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.69□□□□□ -1.66
PDGFRAP16234 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.69□□□□□ -1.66
PDGFRAP16234 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.69□□□□□ -1.66
PDGFRAP16234 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.69□□□□□ -1.66
PDGFRAP16234 AP000827.1-201ENST00000527814 258 ntBASIC4.69□□□□□ -1.66
PDGFRAP16234 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.69□□□□□ -1.66
PDGFRAP16234 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.69□□□□□ -1.66
PDGFRAP16234 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PDGFRAP16234 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.69□□□□□ -1.66
PDGFRAP16234 AC084783.1-201ENST00000565846 910 ntBASIC4.69□□□□□ -1.66
PDGFRAP16234 AC106734.1-201ENST00000568646 663 ntBASIC4.69□□□□□ -1.66
PDGFRAP16234 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.69□□□□□ -1.66
PDGFRAP16234 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.69□□□□□ -1.66
PDGFRAP16234 MIR5096-201ENST00000583713 70 ntBASIC4.69□□□□□ -1.66
PDGFRAP16234 AC110743.1-201ENST00000584870 478 ntBASIC4.69□□□□□ -1.66
PDGFRAP16234 AC005776.1-201ENST00000603164 290 ntBASIC4.69□□□□□ -1.66
PDGFRAP16234 AC008782.1-201ENST00000603386 430 ntBASIC4.69□□□□□ -1.66
PDGFRAP16234 AL355816.1-201ENST00000607951 118 ntBASIC4.69□□□□□ -1.66
PDGFRAP16234 OR2BH1P-201ENST00000608850 864 ntBASIC4.69□□□□□ -1.66
PDGFRAP16234 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.69□□□□□ -1.66
PDGFRAP16234 AP005019.3-201ENST00000620418 560 ntBASIC4.69□□□□□ -1.66
PDGFRAP16234 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PDGFRAP16234 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.69□□□□□ -1.66
PDGFRAP16234 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PDGFRAP16234 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PDGFRAP16234 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PDGFRAP16234 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
PDGFRAP16234 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
PDGFRAP16234 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.68□□□□□ -1.66
PDGFRAP16234 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PDGFRAP16234 RNU1-20P-201ENST00000363314 162 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PDGFRAP16234 MIR708-201ENST00000390708 88 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 RPL7AP25-201ENST00000423357 805 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 AC073069.1-201ENST00000428657 441 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.68□□□□□ -1.66
PDGFRAP16234 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.68□□□□□ -1.66
PDGFRAP16234 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.68□□□□□ -1.66
PDGFRAP16234 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.68□□□□□ -1.66
PDGFRAP16234 RPS27AP17-201ENST00000463344 455 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 AC022795.1-201ENST00000473808 480 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 RN7SL481P-201ENST00000477764 299 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 AC090013.1-201ENST00000485147 480 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 AC013356.1-201ENST00000489027 564 ntBASIC4.68□□□□□ -1.66
PDGFRAP16234 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 211.7 ms