Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 NDUFB4P9-201ENST00000511646 388 ntBASIC8.37□□□□□ -1.07
CD44P16070 SNORD116-25-201ENST00000516517 92 ntBASIC8.37□□□□□ -1.07
CD44P16070 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC8.37□□□□□ -1.07
CD44P16070 AC090281.1-201ENST00000523019 276 ntBASIC8.37□□□□□ -1.07
CD44P16070 AP000859.1-201ENST00000525536 307 ntBASIC8.37□□□□□ -1.07
CD44P16070 AP005597.2-201ENST00000526238 341 ntBASIC8.37□□□□□ -1.07
CD44P16070 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC8.37□□□□□ -1.07
CD44P16070 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC8.37□□□□□ -1.07
CD44P16070 AC004852.1-201ENST00000605206 154 ntBASIC8.37□□□□□ -1.07
CD44P16070 IGKV1OR1-1-201ENST00000613775 347 ntBASIC8.37□□□□□ -1.07
CD44P16070 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 AC011460.1-201ENST00000636268 1834 ntBASIC8.37□□□□□ -1.07
CD44P16070 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC8.37□□□□□ -1.07
CD44P16070 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 CACNB4-250ENST00000637418 2015 ntTSL 5 BASIC8.37□□□□□ -1.07
CD44P16070 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.37□□□□□ -1.07
CD44P16070 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC8.37□□□□□ -1.07
CD44P16070 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CD44P16070 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CD44P16070 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CD44P16070 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.36□□□□□ -1.07
CD44P16070 AP001148.1-201ENST00000624124 2359 ntBASIC8.36□□□□□ -1.07
CD44P16070 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC8.36□□□□□ -1.07
CD44P16070 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CD44P16070 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
CD44P16070 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CD44P16070 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.36□□□□□ -1.07
CD44P16070 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
CD44P16070 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.36□□□□□ -1.07
CD44P16070 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CD44P16070 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CD44P16070 Y_RNA.27-201ENST00000362540 103 ntBASIC8.36□□□□□ -1.07
CD44P16070 CST13P-201ENST00000376992 428 ntBASIC8.36□□□□□ -1.07
CD44P16070 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CD44P16070 IGLC6-201ENST00000410078 317 ntBASIC8.36□□□□□ -1.07
CD44P16070 Y_RNA.602-201ENST00000410535 92 ntBASIC8.36□□□□□ -1.07
CD44P16070 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC8.36□□□□□ -1.07
CD44P16070 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC8.36□□□□□ -1.07
CD44P16070 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC8.36□□□□□ -1.07
CD44P16070 FTH1P1-201ENST00000437933 532 ntBASIC8.36□□□□□ -1.07
CD44P16070 AC239800.1-201ENST00000442049 719 ntBASIC8.36□□□□□ -1.07
CD44P16070 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC8.36□□□□□ -1.07
CD44P16070 AC005077.1-201ENST00000449226 375 ntBASIC8.36□□□□□ -1.07
CD44P16070 RN7SL19P-201ENST00000462522 306 ntBASIC8.36□□□□□ -1.07
CD44P16070 OARD1-209ENST00000471367 401 ntTSL 2 BASIC8.36□□□□□ -1.07
CD44P16070 FTH1P8-201ENST00000498161 514 ntBASIC8.36□□□□□ -1.07
CD44P16070 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC8.36□□□□□ -1.07
CD44P16070 AC024451.1-201ENST00000508013 779 ntBASIC8.36□□□□□ -1.07
CD44P16070 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC8.36□□□□□ -1.07
CD44P16070 USP2-AS1-203ENST00000530002 764 ntTSL 3 BASIC8.36□□□□□ -1.07
CD44P16070 MIR3137-201ENST00000577367 75 ntBASIC8.36□□□□□ -1.07
CD44P16070 SS18L2P2-201ENST00000583960 235 ntBASIC8.36□□□□□ -1.07
CD44P16070 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC8.36□□□□□ -1.07
CD44P16070 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC8.36□□□□□ -1.07
CD44P16070 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC8.36□□□□□ -1.07
CD44P16070 AC005518.2-201ENST00000603254 282 ntBASIC8.36□□□□□ -1.07
CD44P16070 MIR7162-201ENST00000611134 69 ntBASIC8.36□□□□□ -1.07
CD44P16070 AL353662.3-201ENST00000625131 237 ntBASIC8.36□□□□□ -1.07
CD44P16070 SF3A3P1-201ENST00000446317 1477 ntBASIC8.36□□□□□ -1.07
CD44P16070 AL359396.1-201ENST00000623151 2376 ntBASIC8.36□□□□□ -1.07
CD44P16070 AL161891.1-201ENST00000621575 4636 ntBASIC8.36□□□□□ -1.07
CD44P16070 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CD44P16070 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC8.36□□□□□ -1.07
CD44P16070 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CD44P16070 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CD44P16070 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CD44P16070 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
CD44P16070 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CD44P16070 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CD44P16070 DLD-205ENST00000440410 1993 ntTSL 2 BASIC8.35□□□□□ -1.07
CD44P16070 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
CD44P16070 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CD44P16070 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CD44P16070 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
CD44P16070 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC8.35□□□□□ -1.07
CD44P16070 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC8.35□□□□□ -1.07
CD44P16070 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
CD44P16070 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC8.35□□□□□ -1.07
CD44P16070 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
CD44P16070 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
CD44P16070 SNORA68-201ENST00000384437 133 ntBASIC8.35□□□□□ -1.07
CD44P16070 MIR575-201ENST00000385013 94 ntBASIC8.35□□□□□ -1.07
CD44P16070 MIR106B-201ENST00000385301 82 ntBASIC8.35□□□□□ -1.07
CD44P16070 Y_RNA.592-201ENST00000410274 109 ntBASIC8.35□□□□□ -1.07
CD44P16070 RNU6-387P-201ENST00000411331 105 ntBASIC8.35□□□□□ -1.07
CD44P16070 AC023141.10-201ENST00000415634 200 ntBASIC8.35□□□□□ -1.07
CD44P16070 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC8.35□□□□□ -1.07
CD44P16070 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC8.35□□□□□ -1.07
CD44P16070 ANXA2P2-201ENST00000435128 1020 ntBASIC8.35□□□□□ -1.07
CD44P16070 IGKV1OR2-2-201ENST00000451163 355 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms