| MUC1 | P15941 | AC097374.1-203 | ENST00000400783 | 485 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | DHFRP5-201 | ENST00000406944 | 564 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC009237.5-201 | ENST00000414271 | 501 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | LINC01198-201 | ENST00000416521 | 500 nt | TSL 3 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AL159169.1-201 | ENST00000421119 | 127 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC105399.1-201 | ENST00000422418 | 418 nt | TSL 2 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | OR6K4P-201 | ENST00000423179 | 955 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | RPL18P10-201 | ENST00000425606 | 538 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AL732292.1-201 | ENST00000426692 | 226 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC131571.1-201 | ENST00000429821 | 577 nt | TSL 5 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | RPEP2-201 | ENST00000432149 | 701 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | RPL23AP52-201 | ENST00000439311 | 478 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | CBX1P1-201 | ENST00000440184 | 427 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | XKRYP6-201 | ENST00000440468 | 1116 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | XKRYP3-201 | ENST00000442113 | 1116 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | ABCF2P2-201 | ENST00000450549 | 296 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AP000302.1-201 | ENST00000450928 | 666 nt | TSL 2 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC022431.1-201 | ENST00000450941 | 438 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC009963.2-201 | ENST00000453431 | 138 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | SNRPGP5-201 | ENST00000456003 | 220 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC078828.1-201 | ENST00000471993 | 458 nt | TSL 3 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | RPL35P6-201 | ENST00000490024 | 372 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | RPS27AP16-201 | ENST00000492222 | 470 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC112198.3-201 | ENST00000505950 | 441 nt | TSL 3 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | ZBED3-AS1-209 | ENST00000512213 | 681 nt | TSL 3 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | FTH1P9-201 | ENST00000513251 | 355 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC090193.1-201 | ENST00000518633 | 543 nt | TSL 4 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC084024.3-201 | ENST00000520598 | 562 nt | TSL 4 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | C1GALT1P3-201 | ENST00000522049 | 819 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC006064.5-201 | ENST00000541782 | 248 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | LINC02446-201 | ENST00000544591 | 868 nt | TSL 2 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | LINC02386-201 | ENST00000551202 | 509 nt | TSL 3 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AL109766.1-201 | ENST00000555080 | 552 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | PSMB7P1-201 | ENST00000556349 | 514 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AL049875.1-202 | ENST00000556620 | 857 nt | TSL 3 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC011468.1-201 | ENST00000569091 | 675 nt | TSL 1 (best) BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | LINC01630-204 | ENST00000582689 | 539 nt | TSL 4 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC244505.7-201 | ENST00000599675 | 272 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | FAM27D1-201 | ENST00000612308 | 341 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | LRRC2-AS1-202 | ENST00000614743 | 633 nt | TSL 3 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AL121890.3-201 | ENST00000618494 | 516 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | LINC02246-204 | ENST00000625278 | 740 nt | TSL 5 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | LINC02458-201 | ENST00000500381 | 2941 nt | TSL 2 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | GDAP2-202 | ENST00000369443 | 8828 nt | APPRIS P1 TSL 2 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | PHKBP1-201 | ENST00000450951 | 1951 nt | BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | ATXN3-207 | ENST00000503767 | 1315 nt | TSL 1 (best) BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | CNTD1-205 | ENST00000588527 | 1308 nt | TSL 2 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | KCNJ16-209 | ENST00000589377 | 3684 nt | APPRIS P1 TSL 5 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | FOXP2-207 | ENST00000393494 | 2664 nt | APPRIS P2 TSL 5 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | CCDC178-205 | ENST00000406524 | 3039 nt | APPRIS ALT2 TSL 5 BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | DMXL2-202 | ENST00000449909 | 7465 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | BIRC3-201 | ENST00000263464 | 5197 nt | APPRIS P1 TSL 1 (best) BASIC | 3.61 | □□□□□ -1.83 | | |
| MUC1 | P15941 | FNBP1L-206 | ENST00000604705 | 1830 nt | APPRIS ALT1 TSL 5 BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | MAP3K21-201 | ENST00000366622 | 4005 nt | TSL 1 (best) BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | IL23R-202 | ENST00000395227 | 1459 nt | TSL 3 BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | GPR18-202 | ENST00000397470 | 1468 nt | APPRIS P1 TSL 1 (best) BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | USH2A-202 | ENST00000366942 | 6320 nt | TSL 1 (best) BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | UBA6-201 | ENST00000322244 | 9564 nt | APPRIS P1 TSL 1 (best) BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | ZNF107-203 | ENST00000395391 | 6094 nt | TSL 1 (best) BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | ZNF594-201 | ENST00000399604 | 4862 nt | APPRIS P1 BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | DDX4-204 | ENST00000505374 | 2884 nt | APPRIS P1 TSL 1 (best) BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | FAM3C2-201 | ENST00000312214 | 681 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | SPRR2E-202 | ENST00000368751 | 692 nt | APPRIS P1 TSL 1 (best) BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | U3.22-201 | ENST00000391120 | 215 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC093719.1-202 | ENST00000392735 | 373 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | MIR1179-201 | ENST00000408703 | 91 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC009502.1-203 | ENST00000416861 | 496 nt | TSL 2 BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | VN1R31P-201 | ENST00000417498 | 730 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AL807761.1-201 | ENST00000417622 | 171 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AL161631.1-201 | ENST00000417933 | 486 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | SLC4A1APP1-201 | ENST00000419995 | 602 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | RPL7P53-201 | ENST00000421245 | 739 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | RCC2P2-201 | ENST00000422174 | 918 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AL157831.1-201 | ENST00000426134 | 473 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | RPS26P47-201 | ENST00000427219 | 348 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | FHP1-201 | ENST00000442741 | 703 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | RPL7P22-201 | ENST00000466005 | 733 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC104831.1-201 | ENST00000470024 | 444 nt | TSL 3 BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | C10orf128-207 | ENST00000474718 | 614 nt | APPRIS P3 TSL 1 (best) BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AGGF1P3-201 | ENST00000493675 | 1213 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC025470.2-201 | ENST00000506106 | 897 nt | TSL 2 BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC025674.1-201 | ENST00000507074 | 324 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | NREP-AS1-202 | ENST00000507222 | 610 nt | TSL 3 BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC017037.1-201 | ENST00000508460 | 471 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | LINC00616-203 | ENST00000512536 | 568 nt | TSL 4 BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | SNHG27-203 | ENST00000514222 | 680 nt | TSL 3 BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC016598.2-201 | ENST00000514942 | 525 nt | TSL 5 BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | DUX4L52-201 | ENST00000549363 | 777 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC128707.1-201 | ENST00000552230 | 494 nt | TSL 3 BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | GS1-279B7.1-203 | ENST00000565520 | 609 nt | TSL 5 BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC010422.4-201 | ENST00000601420 | 533 nt | TSL 3 BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AL034351.1-201 | ENST00000605288 | 668 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | MKKS-203 | ENST00000609375 | 882 nt | TSL 2 BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AC107308.1-201 | ENST00000615897 | 301 nt | BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | MALAT1-210 | ENST00000617489 | 318 nt | TSL 2 BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | LINC01902-202 | ENST00000636983 | 4607 nt | TSL 5 BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | PTPN12-206 | ENST00000435495 | 2526 nt | TSL 2 BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | MYCBP2-211 | ENST00000544440 | 14664 nt | APPRIS P1 TSL 1 (best) BASIC | 3.6 | □□□□□ -1.83 | | |
| MUC1 | P15941 | SGIP1-206 | ENST00000435165 | 3646 nt | APPRIS ALT2 TSL 2 BASIC | 3.59 | □□□□□ -1.83 | | |
| MUC1 | P15941 | AL158163.1-201 | ENST00000603915 | 1649 nt | BASIC | 3.59 | □□□□□ -1.83 | | |