Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 MKI67P1-201ENST00000604297 1460 ntBASIC6.13□□□□□ -1.43
NID1P14543 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
NID1P14543 AC005618.1-201ENST00000606901 3148 ntBASIC6.13□□□□□ -1.43
NID1P14543 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
NID1P14543 CASC19-228ENST00000641414 1684 ntBASIC6.13□□□□□ -1.43
NID1P14543 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NID1P14543 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NID1P14543 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.13□□□□□ -1.43
NID1P14543 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.13□□□□□ -1.43
NID1P14543 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NID1P14543 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NID1P14543 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
NID1P14543 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
NID1P14543 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NID1P14543 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NID1P14543 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NID1P14543 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
NID1P14543 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NID1P14543 AC007406.5-201ENST00000570140 3170 ntBASIC6.12□□□□□ -1.43
NID1P14543 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NID1P14543 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NID1P14543 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
NID1P14543 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NID1P14543 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NID1P14543 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NID1P14543 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.12□□□□□ -1.43
NID1P14543 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NID1P14543 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
NID1P14543 Y_RNA.46-201ENST00000362695 102 ntBASIC6.12□□□□□ -1.43
NID1P14543 Y_RNA.112-201ENST00000363250 102 ntBASIC6.12□□□□□ -1.43
NID1P14543 Y_RNA.158-201ENST00000363651 101 ntBASIC6.12□□□□□ -1.43
NID1P14543 Y_RNA.176-201ENST00000363815 109 ntBASIC6.12□□□□□ -1.43
NID1P14543 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
NID1P14543 SNORD3H-201ENST00000384486 214 ntBASIC6.12□□□□□ -1.43
NID1P14543 Y_RNA.557-201ENST00000384680 107 ntBASIC6.12□□□□□ -1.43
NID1P14543 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NID1P14543 MIR1266-201ENST00000408125 84 ntBASIC6.12□□□□□ -1.43
NID1P14543 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.12□□□□□ -1.43
NID1P14543 RN7SKP146-201ENST00000410242 334 ntBASIC6.12□□□□□ -1.43
NID1P14543 RNU4-14P-201ENST00000410858 122 ntBASIC6.12□□□□□ -1.43
NID1P14543 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.12□□□□□ -1.43
NID1P14543 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC6.12□□□□□ -1.43
NID1P14543 RPS12P24-201ENST00000412619 387 ntBASIC6.12□□□□□ -1.43
NID1P14543 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.12□□□□□ -1.43
NID1P14543 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
NID1P14543 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.12□□□□□ -1.43
NID1P14543 GAPDHP20-201ENST00000444107 1007 ntBASIC6.12□□□□□ -1.43
NID1P14543 AC104651.2-201ENST00000447549 528 ntBASIC6.12□□□□□ -1.43
NID1P14543 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
NID1P14543 AC062022.1-201ENST00000451026 1684 ntBASIC6.12□□□□□ -1.43
NID1P14543 PRPF38AP1-201ENST00000451976 933 ntBASIC6.12□□□□□ -1.43
NID1P14543 HIGD1AP8-201ENST00000453927 274 ntBASIC6.12□□□□□ -1.43
NID1P14543 RPL37P3-201ENST00000456825 293 ntBASIC6.12□□□□□ -1.43
NID1P14543 RPL7P15-201ENST00000461190 712 ntBASIC6.12□□□□□ -1.43
NID1P14543 RPS4XP10-201ENST00000465034 731 ntBASIC6.12□□□□□ -1.43
NID1P14543 RPL7P22-201ENST00000466005 733 ntBASIC6.12□□□□□ -1.43
NID1P14543 RPL12P31-201ENST00000478433 450 ntBASIC6.12□□□□□ -1.43
NID1P14543 AC015724.1-201ENST00000478577 156 ntBASIC6.12□□□□□ -1.43
NID1P14543 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.12□□□□□ -1.43
NID1P14543 H3F3AP3-201ENST00000497682 407 ntBASIC6.12□□□□□ -1.43
NID1P14543 AL035404.1-201ENST00000497982 568 ntBASIC6.12□□□□□ -1.43
NID1P14543 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.12□□□□□ -1.43
NID1P14543 AC009567.2-201ENST00000502989 349 ntBASIC6.12□□□□□ -1.43
NID1P14543 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.12□□□□□ -1.43
NID1P14543 AC107222.1-201ENST00000510899 637 ntBASIC6.12□□□□□ -1.43
NID1P14543 RN7SKP183-201ENST00000517169 324 ntBASIC6.12□□□□□ -1.43
NID1P14543 RN7SKP295-201ENST00000517264 153 ntBASIC6.12□□□□□ -1.43
NID1P14543 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.12□□□□□ -1.43
NID1P14543 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC6.12□□□□□ -1.43
NID1P14543 HMGB1P41-201ENST00000520234 440 ntBASIC6.12□□□□□ -1.43
NID1P14543 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC6.12□□□□□ -1.43
NID1P14543 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.12□□□□□ -1.43
NID1P14543 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.12□□□□□ -1.43
NID1P14543 OR52K3P-201ENST00000531655 943 ntBASIC6.12□□□□□ -1.43
NID1P14543 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NID1P14543 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.12□□□□□ -1.43
NID1P14543 AP003115.1-201ENST00000569849 463 ntBASIC6.12□□□□□ -1.43
NID1P14543 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.12□□□□□ -1.43
NID1P14543 MIR4312-201ENST00000579909 76 ntBASIC6.12□□□□□ -1.43
NID1P14543 SS18L2P2-201ENST00000583960 235 ntBASIC6.12□□□□□ -1.43
NID1P14543 AC067852.5-201ENST00000589299 310 ntBASIC6.12□□□□□ -1.43
NID1P14543 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.12□□□□□ -1.43
NID1P14543 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC6.12□□□□□ -1.43
NID1P14543 RPS4XP21-201ENST00000603814 750 ntBASIC6.12□□□□□ -1.43
NID1P14543 AL683813.2-201ENST00000605245 502 ntBASIC6.12□□□□□ -1.43
NID1P14543 AC139426.3-201ENST00000605648 2059 ntBASIC6.12□□□□□ -1.43
NID1P14543 BX664608.1-201ENST00000610519 487 ntBASIC6.12□□□□□ -1.43
NID1P14543 AC097641.3-201ENST00000613523 464 ntBASIC6.12□□□□□ -1.43
NID1P14543 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
NID1P14543 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.12□□□□□ -1.43
NID1P14543 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
NID1P14543 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.12□□□□□ -1.43
NID1P14543 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NID1P14543 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.11□□□□□ -1.43
NID1P14543 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NID1P14543 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NID1P14543 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
NID1P14543 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
NID1P14543 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
NID1P14543 ZNF658B-201ENST00000602828 3408 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms