Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC6.62□□□□□ -1.35
TOP2AP11388 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC6.62□□□□□ -1.35
TOP2AP11388 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.62□□□□□ -1.35
TOP2AP11388 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.62□□□□□ -1.35
TOP2AP11388 AF131215.7-201ENST00000602443 707 ntBASIC6.62□□□□□ -1.35
TOP2AP11388 AC244258.1-201ENST00000637553 1071 ntBASIC6.62□□□□□ -1.35
TOP2AP11388 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
TOP2AP11388 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC6.62□□□□□ -1.35
TOP2AP11388 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TOP2AP11388 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TOP2AP11388 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
TOP2AP11388 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
TOP2AP11388 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC6.61□□□□□ -1.35
TOP2AP11388 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TOP2AP11388 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
TOP2AP11388 OR52E6-202ENST00000379946 954 ntBASIC6.61□□□□□ -1.35
TOP2AP11388 AC011742.1-201ENST00000431448 434 ntBASIC6.61□□□□□ -1.35
TOP2AP11388 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.61□□□□□ -1.35
TOP2AP11388 AL591503.2-201ENST00000442314 1005 ntBASIC6.61□□□□□ -1.35
TOP2AP11388 RBMY2UP-201ENST00000453474 324 ntBASIC6.61□□□□□ -1.35
TOP2AP11388 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.61□□□□□ -1.35
TOP2AP11388 SNORD105B-201ENST00000458770 79 ntBASIC6.61□□□□□ -1.35
TOP2AP11388 RN7SL585P-201ENST00000470538 280 ntBASIC6.61□□□□□ -1.35
TOP2AP11388 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC6.61□□□□□ -1.35
TOP2AP11388 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.61□□□□□ -1.35
TOP2AP11388 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TOP2AP11388 AC007066.2-202ENST00000566531 914 ntBASIC6.61□□□□□ -1.35
TOP2AP11388 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.61□□□□□ -1.35
TOP2AP11388 AL355365.1-201ENST00000616480 294 ntBASIC6.61□□□□□ -1.35
TOP2AP11388 PCNP-208ENST00000627393 136 ntTSL 2 BASIC6.61□□□□□ -1.35
TOP2AP11388 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TOP2AP11388 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TOP2AP11388 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
TOP2AP11388 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC6.61□□□□□ -1.35
TOP2AP11388 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.61□□□□□ -1.35
TOP2AP11388 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.61□□□□□ -1.35
TOP2AP11388 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TOP2AP11388 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.6□□□□□ -1.35
TOP2AP11388 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.6□□□□□ -1.35
TOP2AP11388 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC6.6□□□□□ -1.35
TOP2AP11388 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC6.6□□□□□ -1.35
TOP2AP11388 GNRHR2P1-201ENST00000555315 631 ntBASIC6.6□□□□□ -1.35
TOP2AP11388 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.6□□□□□ -1.35
TOP2AP11388 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC6.6□□□□□ -1.35
TOP2AP11388 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TOP2AP11388 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TOP2AP11388 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC6.6□□□□□ -1.35
TOP2AP11388 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TOP2AP11388 CBX1P3-201ENST00000413296 527 ntBASIC6.6□□□□□ -1.35
TOP2AP11388 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC6.6□□□□□ -1.35
TOP2AP11388 BNIP3P19-201ENST00000605397 577 ntBASIC6.6□□□□□ -1.35
TOP2AP11388 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TOP2AP11388 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
TOP2AP11388 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC6.59□□□□□ -1.35
TOP2AP11388 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC6.59□□□□□ -1.35
TOP2AP11388 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC6.59□□□□□ -1.35
TOP2AP11388 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TOP2AP11388 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
TOP2AP11388 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TOP2AP11388 NAMPTP1-201ENST00000440465 2514 ntBASIC6.59□□□□□ -1.35
TOP2AP11388 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TOP2AP11388 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.59□□□□□ -1.35
TOP2AP11388 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
TOP2AP11388 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
TOP2AP11388 RPL21P110-201ENST00000433345 446 ntBASIC6.59□□□□□ -1.35
TOP2AP11388 HLA-N-201ENST00000437516 135 ntBASIC6.59□□□□□ -1.35
TOP2AP11388 SNORA71B-202ENST00000439232 272 ntBASIC6.59□□□□□ -1.35
TOP2AP11388 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC6.59□□□□□ -1.35
TOP2AP11388 OR52Y1P-201ENST00000452418 828 ntBASIC6.59□□□□□ -1.35
TOP2AP11388 MORF4L2P1-201ENST00000503761 858 ntBASIC6.59□□□□□ -1.35
TOP2AP11388 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.59□□□□□ -1.35
TOP2AP11388 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.59□□□□□ -1.35
TOP2AP11388 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.59□□□□□ -1.35
TOP2AP11388 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC6.59□□□□□ -1.35
TOP2AP11388 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
TOP2AP11388 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
TOP2AP11388 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
TOP2AP11388 DDX18P6-201ENST00000450119 1997 ntBASIC6.58□□□□□ -1.36
TOP2AP11388 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TOP2AP11388 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TOP2AP11388 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TOP2AP11388 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.58□□□□□ -1.36
TOP2AP11388 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
TOP2AP11388 AC005326.1-201ENST00000429197 123 ntBASIC6.58□□□□□ -1.36
TOP2AP11388 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC6.58□□□□□ -1.36
TOP2AP11388 RPS4XP12-201ENST00000461747 709 ntBASIC6.58□□□□□ -1.36
TOP2AP11388 AC119751.5-201ENST00000514077 770 ntBASIC6.58□□□□□ -1.36
TOP2AP11388 AP000889.1-201ENST00000530968 660 ntBASIC6.58□□□□□ -1.36
TOP2AP11388 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.58□□□□□ -1.36
TOP2AP11388 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.58□□□□□ -1.36
TOP2AP11388 AC079880.2-201ENST00000603790 1213 ntBASIC6.58□□□□□ -1.36
TOP2AP11388 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.58□□□□□ -1.36
TOP2AP11388 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
TOP2AP11388 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
TOP2AP11388 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
TOP2AP11388 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
TOP2AP11388 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC6.57□□□□□ -1.36
TOP2AP11388 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
TOP2AP11388 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.57□□□□□ -1.36
TOP2AP11388 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms