Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CSB-PGBD3P0DP91 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
CSB-PGBD3P0DP91 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CSB-PGBD3P0DP91 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AP004607.3-201ENST00000530354 3915 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 RLIMP2-201ENST00000427891 1563 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AL731532.1-201ENST00000623972 4236 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 RNU6-317P-201ENST00000384031 107 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 Y_RNA.582-201ENST00000391023 95 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 RPS21P8-201ENST00000413365 247 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AC007562.1-201ENST00000421819 517 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 FABP7P1-201ENST00000424004 391 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AC233728.2-201ENST00000425348 757 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AC023274.2-201ENST00000445264 521 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AC098824.1-201ENST00000453565 980 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 RPS3AP17-201ENST00000472594 777 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 MTCO3P9-201ENST00000506989 781 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 PGAM1P13-201ENST00000507497 754 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 RN7SKP288-201ENST00000516227 268 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 OR7K1P-201ENST00000546439 926 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 UBE2V2P2-201ENST00000587677 504 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AC010487.1-201ENST00000594408 1172 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AC010680.3-201ENST00000604215 520 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AC020765.1-201ENST00000604296 328 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AL049634.3-201ENST00000604968 457 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AL162730.1-201ENST00000605734 292 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 Mico1.1-201ENST00000611698 204 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AC005332.6-201ENST00000613178 446 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AC002553.4-201ENST00000616896 331 ntBASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC7.64□□□□□ -1.19
CSB-PGBD3P0DP91 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 Y_RNA.453-201ENST00000384223 109 ntBASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 RN7SKP151-201ENST00000410230 316 ntBASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 RPL23AP39-201ENST00000415533 405 ntBASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 RPS24P8-201ENST00000431490 402 ntBASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 AC079922.1-201ENST00000443291 359 ntBASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 RNU1-88P-201ENST00000459274 128 ntBASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 AC010307.1-201ENST00000467206 836 ntBASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 AC026254.2-201ENST00000475295 371 ntBASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 AC013828.1-201ENST00000481845 158 ntBASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 RPSAP50-201ENST00000481955 852 ntBASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 RPS27P23-201ENST00000487608 251 ntBASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 MTCYBP18-201ENST00000501056 747 ntBASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 AC108043.1-201ENST00000512696 574 ntBASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 AC022483.1-201ENST00000514020 567 ntBASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 RNU6-885P-201ENST00000516607 104 ntBASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 RN7SKP98-201ENST00000517070 156 ntBASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.63□□□□□ -1.19
CSB-PGBD3P0DP91 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms