Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
UBCP0CG48 NOL8P1-201ENST00000508336 3529 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.79□□□□□ -1.8
UBCP0CG48 AC103591.2-201ENST00000265259 766 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 RNA5SP87-201ENST00000384155 118 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 RN7SKP106-201ENST00000410832 272 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 AL161631.1-201ENST00000417933 486 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.79□□□□□ -1.8
UBCP0CG48 RPS12P23-201ENST00000419579 400 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 AC104837.2-201ENST00000427236 424 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 HMGB1P21-201ENST00000502313 581 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 FTH1P24-201ENST00000503502 462 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 AC010374.1-201ENST00000503762 1237 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 AC108145.1-201ENST00000503770 153 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 OR5M14P-201ENST00000506803 618 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 NDUFB5P1-201ENST00000508134 564 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 ATP1B1P1-201ENST00000509767 915 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 AC093770.1-201ENST00000511559 571 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.79□□□□□ -1.8
UBCP0CG48 BRD9P1-201ENST00000529855 560 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.79□□□□□ -1.8
UBCP0CG48 AL360157.1-201ENST00000565962 87 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 RN7SL690P-201ENST00000582087 240 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.79□□□□□ -1.8
UBCP0CG48 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.79□□□□□ -1.8
UBCP0CG48 AC083899.3-201ENST00000603413 594 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 AC079587.1-201ENST00000603846 277 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 HMGB1P50-201ENST00000605814 607 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 SDR42E1P1-201ENST00000611327 477 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.79□□□□□ -1.8
UBCP0CG48 MIR6729-201ENST00000618194 65 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 AL645927.2-201ENST00000618350 349 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 AC018445.2-201ENST00000622987 260 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 AC053481.2-202ENST00000582394 1500 ntBASIC3.79□□□□□ -1.8
UBCP0CG48 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.79□□□□□ -1.8
UBCP0CG48 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.79□□□□□ -1.8
UBCP0CG48 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
UBCP0CG48 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
UBCP0CG48 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
UBCP0CG48 AC092162.3-201ENST00000624511 1624 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBCP0CG48 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.78□□□□□ -1.8
UBCP0CG48 MTCO1P14-201ENST00000441695 1559 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
UBCP0CG48 RNA5SP388-201ENST00000362584 119 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.78□□□□□ -1.8
UBCP0CG48 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.78□□□□□ -1.8
UBCP0CG48 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
UBCP0CG48 RNU6-452P-201ENST00000384406 107 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 AC092642.1-201ENST00000392417 425 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 AL049697.2-201ENST00000403708 294 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 RN7SKP56-201ENST00000410513 331 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
UBCP0CG48 AL031736.2-201ENST00000426573 787 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.78□□□□□ -1.8
UBCP0CG48 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.78□□□□□ -1.8
UBCP0CG48 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.78□□□□□ -1.8
UBCP0CG48 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.78□□□□□ -1.8
UBCP0CG48 RPL34P26-201ENST00000445636 354 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.78□□□□□ -1.8
UBCP0CG48 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.78□□□□□ -1.8
UBCP0CG48 RPL21P71-201ENST00000465598 459 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 AC053481.1-201ENST00000467217 306 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 RN7SL329P-201ENST00000467740 299 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 AC092324.1-201ENST00000468671 324 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.78□□□□□ -1.8
UBCP0CG48 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.78□□□□□ -1.8
UBCP0CG48 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.78□□□□□ -1.8
UBCP0CG48 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.78□□□□□ -1.8
UBCP0CG48 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.78□□□□□ -1.8
UBCP0CG48 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.78□□□□□ -1.8
UBCP0CG48 MTND4LP24-201ENST00000572277 291 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 AP001180.3-201ENST00000582221 145 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 AC069061.3-201ENST00000582254 823 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 AP001160.4-201ENST00000596971 382 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 AC133644.2-201ENST00000608142 540 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 MIR7155-201ENST00000615925 56 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.78□□□□□ -1.8
UBCP0CG48 AP005019.3-201ENST00000620418 560 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 MIR7702-201ENST00000621931 59 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.78□□□□□ -1.8
UBCP0CG48 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
UBCP0CG48 RARSP1-201ENST00000542842 1418 ntBASIC3.78□□□□□ -1.8
UBCP0CG48 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
UBCP0CG48 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBCP0CG48 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
UBCP0CG48 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBCP0CG48 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBCP0CG48 DCAF13P3-201ENST00000561147 1334 ntBASIC3.77□□□□□ -1.81
UBCP0CG48 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.77□□□□□ -1.81
UBCP0CG48 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UBCP0CG48 SNORD113.2-201ENST00000364166 89 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms