Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC010460.1-201ENST00000507087 466 ntBASIC4.39□□□□□ -1.71
RETP07949 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.39□□□□□ -1.71
RETP07949 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RETP07949 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.39□□□□□ -1.71
RETP07949 AC105233.3-201ENST00000531125 744 ntBASIC4.39□□□□□ -1.71
RETP07949 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.39□□□□□ -1.71
RETP07949 AL139286.1-201ENST00000604465 483 ntBASIC4.39□□□□□ -1.71
RETP07949 AC008966.2-201ENST00000606157 453 ntBASIC4.39□□□□□ -1.71
RETP07949 SNORA35B-201ENST00000607417 129 ntBASIC4.39□□□□□ -1.71
RETP07949 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.39□□□□□ -1.71
RETP07949 AC039056.2-201ENST00000622261 511 ntBASIC4.39□□□□□ -1.71
RETP07949 CR392039.5-201ENST00000623201 510 ntBASIC4.39□□□□□ -1.71
RETP07949 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.39□□□□□ -1.71
RETP07949 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RETP07949 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.39□□□□□ -1.71
RETP07949 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
RETP07949 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.39□□□□□ -1.71
RETP07949 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RETP07949 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RETP07949 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.39□□□□□ -1.71
RETP07949 AC092162.3-201ENST00000624511 1624 ntBASIC4.39□□□□□ -1.71
RETP07949 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RETP07949 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RETP07949 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RETP07949 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RETP07949 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.38□□□□□ -1.71
RETP07949 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.38□□□□□ -1.71
RETP07949 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RETP07949 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RETP07949 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.38□□□□□ -1.71
RETP07949 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RETP07949 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.38□□□□□ -1.71
RETP07949 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
RETP07949 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
RETP07949 CPHL1P-201ENST00000461341 3407 ntBASIC4.38□□□□□ -1.71
RETP07949 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RETP07949 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RETP07949 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
RETP07949 MIR483-201ENST00000385070 76 ntBASIC4.38□□□□□ -1.71
RETP07949 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.38□□□□□ -1.71
RETP07949 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.38□□□□□ -1.71
RETP07949 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.38□□□□□ -1.71
RETP07949 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.38□□□□□ -1.71
RETP07949 AC108032.1-201ENST00000416706 207 ntBASIC4.38□□□□□ -1.71
RETP07949 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.38□□□□□ -1.71
RETP07949 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RETP07949 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.38□□□□□ -1.71
RETP07949 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RETP07949 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.38□□□□□ -1.71
RETP07949 RPS29P7-201ENST00000439662 171 ntBASIC4.38□□□□□ -1.71
RETP07949 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.38□□□□□ -1.71
RETP07949 RPS26P28-201ENST00000470806 348 ntBASIC4.38□□□□□ -1.71
RETP07949 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.38□□□□□ -1.71
RETP07949 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.38□□□□□ -1.71
RETP07949 AC026726.1-201ENST00000512859 601 ntBASIC4.38□□□□□ -1.71
RETP07949 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.38□□□□□ -1.71
RETP07949 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.38□□□□□ -1.71
RETP07949 AC025423.2-201ENST00000537570 439 ntBASIC4.38□□□□□ -1.71
RETP07949 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.38□□□□□ -1.71
RETP07949 MTND6P33-201ENST00000571794 183 ntBASIC4.38□□□□□ -1.71
RETP07949 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.38□□□□□ -1.71
RETP07949 AC091178.1-203ENST00000584586 279 ntBASIC4.38□□□□□ -1.71
RETP07949 AC004825.2-201ENST00000616634 455 ntBASIC4.38□□□□□ -1.71
RETP07949 AL645927.2-201ENST00000618350 349 ntBASIC4.38□□□□□ -1.71
RETP07949 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RETP07949 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RETP07949 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
RETP07949 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RETP07949 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RETP07949 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.37□□□□□ -1.71
RETP07949 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.37□□□□□ -1.71
RETP07949 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RETP07949 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RETP07949 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
RETP07949 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.37□□□□□ -1.71
RETP07949 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RETP07949 MIR3074-201ENST00000384885 81 ntBASIC4.37□□□□□ -1.71
RETP07949 AL607077.1-201ENST00000401718 499 ntBASIC4.37□□□□□ -1.71
RETP07949 VN1R31P-201ENST00000417498 730 ntBASIC4.37□□□□□ -1.71
RETP07949 SEC63P1-201ENST00000425785 1258 ntBASIC4.37□□□□□ -1.71
RETP07949 NPM1P26-201ENST00000426339 738 ntBASIC4.37□□□□□ -1.71
RETP07949 DPY19L1P2-201ENST00000426647 915 ntBASIC4.37□□□□□ -1.71
RETP07949 GOT2P5-201ENST00000433995 546 ntBASIC4.37□□□□□ -1.71
RETP07949 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.37□□□□□ -1.71
RETP07949 AL935212.3-201ENST00000450729 284 ntBASIC4.37□□□□□ -1.71
RETP07949 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.37□□□□□ -1.71
RETP07949 MYL12AP1-201ENST00000518490 515 ntBASIC4.37□□□□□ -1.71
RETP07949 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.37□□□□□ -1.71
RETP07949 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.37□□□□□ -1.71
RETP07949 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.37□□□□□ -1.71
RETP07949 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RETP07949 RN7SL703P-201ENST00000578485 302 ntBASIC4.37□□□□□ -1.71
RETP07949 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.37□□□□□ -1.71
RETP07949 AC023762.1-201ENST00000603280 584 ntBASIC4.37□□□□□ -1.71
RETP07949 AC090912.3-201ENST00000609775 533 ntBASIC4.37□□□□□ -1.71
RETP07949 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
RETP07949 OR2L1P-202ENST00000641567 1023 ntBASIC4.37□□□□□ -1.71
RETP07949 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RETP07949 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RETP07949 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms