Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 MRPS35P3-201ENST00000603189 709 ntBASIC3.96□□□□□ -1.78
HLA-DQB2P05538 AC067959.1-201ENST00000604334 379 ntBASIC3.96□□□□□ -1.78
HLA-DQB2P05538 AL158196.1-201ENST00000616786 434 ntBASIC3.96□□□□□ -1.78
HLA-DQB2P05538 AL645927.2-201ENST00000618350 349 ntBASIC3.96□□□□□ -1.78
HLA-DQB2P05538 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 MTND4P26-201ENST00000415971 1359 ntBASIC3.96□□□□□ -1.78
HLA-DQB2P05538 FAM91A3P-201ENST00000456826 2544 ntBASIC3.96□□□□□ -1.78
HLA-DQB2P05538 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HLA-DQB2P05538 IQCB2P-201ENST00000401788 1633 ntBASIC3.95□□□□□ -1.78
HLA-DQB2P05538 THAP12P8-201ENST00000447914 2115 ntBASIC3.95□□□□□ -1.78
HLA-DQB2P05538 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 BDP1P-201ENST00000582658 1990 ntBASIC3.95□□□□□ -1.78
HLA-DQB2P05538 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 PPIAP31-201ENST00000405422 495 ntBASIC3.95□□□□□ -1.78
HLA-DQB2P05538 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 NPM1P34-201ENST00000428821 893 ntBASIC3.95□□□□□ -1.78
HLA-DQB2P05538 BX119904.1-201ENST00000432026 348 ntBASIC3.95□□□□□ -1.78
HLA-DQB2P05538 Z74696.2-201ENST00000436514 498 ntBASIC3.95□□□□□ -1.78
HLA-DQB2P05538 PRELID3BP5-201ENST00000508612 460 ntBASIC3.95□□□□□ -1.78
HLA-DQB2P05538 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 RNU6-352P-201ENST00000516908 107 ntBASIC3.95□□□□□ -1.78
HLA-DQB2P05538 RNU6-943P-201ENST00000516960 98 ntBASIC3.95□□□□□ -1.78
HLA-DQB2P05538 MIR2116-201ENST00000517221 80 ntBASIC3.95□□□□□ -1.78
HLA-DQB2P05538 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 OR4A12P-201ENST00000530847 918 ntBASIC3.95□□□□□ -1.78
HLA-DQB2P05538 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 AC015726.1-201ENST00000602353 681 ntBASIC3.95□□□□□ -1.78
HLA-DQB2P05538 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 MIR6875-201ENST00000617506 72 ntBASIC3.95□□□□□ -1.78
HLA-DQB2P05538 AC068831.8-201ENST00000620171 435 ntBASIC3.95□□□□□ -1.78
HLA-DQB2P05538 AC068724.3-201ENST00000625906 87 ntBASIC3.95□□□□□ -1.78
HLA-DQB2P05538 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HLA-DQB2P05538 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 OR10J6P-201ENST00000289731 930 ntBASIC3.94□□□□□ -1.78
HLA-DQB2P05538 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 RAB9AP4-201ENST00000415230 609 ntBASIC3.94□□□□□ -1.78
HLA-DQB2P05538 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 AL451050.1-201ENST00000450126 415 ntBASIC3.94□□□□□ -1.78
HLA-DQB2P05538 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 RPL21P11-201ENST00000461458 483 ntBASIC3.94□□□□□ -1.78
HLA-DQB2P05538 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 AC069499.1-201ENST00000489433 509 ntBASIC3.94□□□□□ -1.78
HLA-DQB2P05538 AGGF1P3-201ENST00000493675 1213 ntBASIC3.94□□□□□ -1.78
HLA-DQB2P05538 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 RN7SL703P-201ENST00000578485 302 ntBASIC3.94□□□□□ -1.78
HLA-DQB2P05538 AL606490.9-201ENST00000603331 271 ntBASIC3.94□□□□□ -1.78
HLA-DQB2P05538 AP003392.5-201ENST00000607857 415 ntBASIC3.94□□□□□ -1.78
HLA-DQB2P05538 AL159169.2-201ENST00000610061 1269 ntBASIC3.94□□□□□ -1.78
HLA-DQB2P05538 AC074276.2-201ENST00000619891 348 ntBASIC3.94□□□□□ -1.78
HLA-DQB2P05538 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HLA-DQB2P05538 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AC018555.1-201ENST00000567548 1980 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 RNA5SP97-201ENST00000365006 84 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 RNU6-213P-201ENST00000384051 104 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 MIR199A2-201ENST00000385289 110 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AL589994.1-201ENST00000404962 340 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 AL512430.2-201ENST00000406786 339 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-DQB2P05538 RNU6-628P-201ENST00000410675 107 ntBASIC3.93□□□□□ -1.78
HLA-DQB2P05538 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms