Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.23□□□□□ -1.41
PDGFAP04085 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFAP04085 AL122023.1-201ENST00000622847 530 ntBASIC6.23□□□□□ -1.41
PDGFAP04085 SNORA16A-202ENST00000628458 135 ntBASIC6.23□□□□□ -1.41
PDGFAP04085 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.23□□□□□ -1.41
PDGFAP04085 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PDGFAP04085 MIR1302-1-201ENST00000637932 143 ntBASIC6.23□□□□□ -1.41
PDGFAP04085 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFAP04085 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFAP04085 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFAP04085 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFAP04085 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFAP04085 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.23□□□□□ -1.41
PDGFAP04085 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFAP04085 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.23□□□□□ -1.41
PDGFAP04085 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFAP04085 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFAP04085 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFAP04085 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.22□□□□□ -1.41
PDGFAP04085 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PDGFAP04085 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFAP04085 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.22□□□□□ -1.41
PDGFAP04085 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFAP04085 AC092724.1-201ENST00000624623 3397 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 MAPK10-357ENST00000641831 2858 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFAP04085 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFAP04085 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.22□□□□□ -1.41
PDGFAP04085 RNA5SP321-201ENST00000362722 111 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 Y_RNA.58-201ENST00000362807 102 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 Y_RNA.154-201ENST00000363624 102 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 RNA5SP433-201ENST00000364491 114 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 RN7SKP237-201ENST00000364663 301 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 RNY3P1-201ENST00000365085 102 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 RNY3-201ENST00000365484 102 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFAP04085 Y_RNA.490-201ENST00000384413 102 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 RNA5SP474-201ENST00000391234 90 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 AC005522.1-201ENST00000395416 346 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 PSMA6P1-201ENST00000400275 741 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 AL162578.1-201ENST00000406202 378 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 AL354719.1-201ENST00000406535 843 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 RNU2-9P-201ENST00000410194 145 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 AC009161.1-201ENST00000417306 376 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.22□□□□□ -1.41
PDGFAP04085 AL121916.1-201ENST00000429405 308 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 RBMY2QP-201ENST00000429799 1147 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.22□□□□□ -1.41
PDGFAP04085 RPL36AP53-201ENST00000432891 316 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 AL627308.1-201ENST00000435693 821 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFAP04085 AC018638.3-201ENST00000461273 132 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 RPL23AP41-201ENST00000484754 458 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 RPS4XP14-201ENST00000493072 781 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 RN7SL362P-201ENST00000494228 267 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 NIPA2P2-201ENST00000496376 1083 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 GAPDHP56-201ENST00000506031 988 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PDGFAP04085 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFAP04085 AC073581.1-201ENST00000519036 575 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.22□□□□□ -1.41
PDGFAP04085 AC022616.3-201ENST00000523940 148 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.22□□□□□ -1.41
PDGFAP04085 OR4R1P-201ENST00000529879 463 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.22□□□□□ -1.41
PDGFAP04085 AL845552.1-201ENST00000556820 323 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.22□□□□□ -1.41
PDGFAP04085 AL356432.3-201ENST00000568952 465 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 AC067852.5-201ENST00000589299 310 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 AC009955.2-201ENST00000597288 542 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.22□□□□□ -1.41
PDGFAP04085 AP001836.1-201ENST00000604675 523 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 Z84480.1-201ENST00000605131 311 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC6.22□□□□□ -1.41
PDGFAP04085 BX323046.1-201ENST00000610145 535 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 SNX18P10-201ENST00000625014 519 ntBASIC6.22□□□□□ -1.41
PDGFAP04085 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC6.22□□□□□ -1.41
PDGFAP04085 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC6.22□□□□□ -1.41
PDGFAP04085 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFAP04085 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PDGFAP04085 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFAP04085 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
PDGFAP04085 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFAP04085 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.21□□□□□ -1.41
PDGFAP04085 AP000432.2-201ENST00000624164 2048 ntBASIC6.21□□□□□ -1.41
PDGFAP04085 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PDGFAP04085 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PDGFAP04085 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
PDGFAP04085 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFAP04085 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFAP04085 RNU6-28P-201ENST00000362378 107 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 RNU6-169P-201ENST00000365336 107 ntBASIC6.21□□□□□ -1.42
PDGFAP04085 RN7SKP47-201ENST00000365347 328 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms