Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.31□□□□□ -1.72
APOEP02649 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.31□□□□□ -1.72
APOEP02649 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.31□□□□□ -1.72
APOEP02649 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.31□□□□□ -1.72
APOEP02649 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.31□□□□□ -1.72
APOEP02649 AL591034.3-201ENST00000605511 685 ntBASIC4.31□□□□□ -1.72
APOEP02649 AC023813.4-201ENST00000607580 580 ntBASIC4.31□□□□□ -1.72
APOEP02649 OR6R2P-201ENST00000609216 300 ntBASIC4.31□□□□□ -1.72
APOEP02649 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.31□□□□□ -1.72
APOEP02649 MIR4727-201ENST00000622232 55 ntBASIC4.31□□□□□ -1.72
APOEP02649 MIR492-201ENST00000638676 116 ntBASIC4.31□□□□□ -1.72
APOEP02649 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
APOEP02649 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
APOEP02649 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
APOEP02649 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
APOEP02649 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
APOEP02649 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
APOEP02649 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
APOEP02649 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.3□□□□□ -1.72
APOEP02649 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
APOEP02649 AC011155.1-201ENST00000316512 456 ntBASIC4.3□□□□□ -1.72
APOEP02649 RN7SKP227-201ENST00000364445 330 ntBASIC4.3□□□□□ -1.72
APOEP02649 RNU11-4P-201ENST00000391149 133 ntBASIC4.3□□□□□ -1.72
APOEP02649 MIR1183-201ENST00000408856 89 ntBASIC4.3□□□□□ -1.72
APOEP02649 AC093698.1-201ENST00000423843 571 ntBASIC4.3□□□□□ -1.72
APOEP02649 MTCO1P51-201ENST00000427672 1060 ntBASIC4.3□□□□□ -1.72
APOEP02649 RPS27AP12-201ENST00000429552 465 ntBASIC4.3□□□□□ -1.72
APOEP02649 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.3□□□□□ -1.72
APOEP02649 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.3□□□□□ -1.72
APOEP02649 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.3□□□□□ -1.72
APOEP02649 RPL38P1-201ENST00000460914 211 ntBASIC4.3□□□□□ -1.72
APOEP02649 EIF2S2P4-201ENST00000461070 984 ntBASIC4.3□□□□□ -1.72
APOEP02649 AC068587.1-201ENST00000483613 781 ntBASIC4.3□□□□□ -1.72
APOEP02649 RPL29P14-201ENST00000495837 428 ntBASIC4.3□□□□□ -1.72
APOEP02649 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.3□□□□□ -1.72
APOEP02649 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.3□□□□□ -1.72
APOEP02649 HPRT1P2-201ENST00000505250 544 ntBASIC4.3□□□□□ -1.72
APOEP02649 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.3□□□□□ -1.72
APOEP02649 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.3□□□□□ -1.72
APOEP02649 AC092851.1-201ENST00000535964 478 ntBASIC4.3□□□□□ -1.72
APOEP02649 TOMM20P2-201ENST00000540082 421 ntBASIC4.3□□□□□ -1.72
APOEP02649 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
APOEP02649 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
APOEP02649 AC012603.1-201ENST00000606424 528 ntBASIC4.3□□□□□ -1.72
APOEP02649 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.3□□□□□ -1.72
APOEP02649 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
APOEP02649 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
APOEP02649 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
APOEP02649 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.3□□□□□ -1.72
APOEP02649 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.3□□□□□ -1.72
APOEP02649 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
APOEP02649 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.3□□□□□ -1.72
APOEP02649 AC095050.2-201ENST00000510748 1458 ntBASIC4.3□□□□□ -1.72
APOEP02649 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
APOEP02649 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
APOEP02649 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
APOEP02649 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
APOEP02649 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.29□□□□□ -1.72
APOEP02649 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
APOEP02649 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.29□□□□□ -1.72
APOEP02649 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
APOEP02649 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
APOEP02649 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.29□□□□□ -1.72
APOEP02649 OR11H4-201ENST00000315409 1082 ntBASIC4.29□□□□□ -1.72
APOEP02649 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.29□□□□□ -1.72
APOEP02649 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
APOEP02649 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
APOEP02649 ENSAP1-201ENST00000392855 326 ntBASIC4.29□□□□□ -1.72
APOEP02649 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.29□□□□□ -1.72
APOEP02649 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.29□□□□□ -1.72
APOEP02649 EIF2S2P3-201ENST00000428356 999 ntBASIC4.29□□□□□ -1.72
APOEP02649 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.29□□□□□ -1.72
APOEP02649 FCF1P7-201ENST00000451185 558 ntBASIC4.29□□□□□ -1.72
APOEP02649 RPL7P1-201ENST00000468161 747 ntBASIC4.29□□□□□ -1.72
APOEP02649 RPL7P9-201ENST00000468715 747 ntBASIC4.29□□□□□ -1.72
APOEP02649 AC106872.2-201ENST00000494303 480 ntBASIC4.29□□□□□ -1.72
APOEP02649 HNRNPKP5-201ENST00000515300 253 ntBASIC4.29□□□□□ -1.72
APOEP02649 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.29□□□□□ -1.72
APOEP02649 RN7SL600P-201ENST00000581811 299 ntBASIC4.29□□□□□ -1.72
APOEP02649 RNU4-89P-201ENST00000607443 133 ntBASIC4.29□□□□□ -1.72
APOEP02649 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.29□□□□□ -1.72
APOEP02649 AL731566.2-201ENST00000618971 317 ntBASIC4.29□□□□□ -1.72
APOEP02649 AC016717.3-201ENST00000624730 554 ntBASIC4.29□□□□□ -1.72
APOEP02649 AP005264.7-201ENST00000625003 745 ntBASIC4.29□□□□□ -1.72
APOEP02649 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
APOEP02649 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
APOEP02649 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
APOEP02649 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
APOEP02649 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.29□□□□□ -1.72
APOEP02649 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
APOEP02649 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
APOEP02649 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.28□□□□□ -1.72
APOEP02649 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
APOEP02649 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
APOEP02649 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
APOEP02649 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
APOEP02649 SNORA60-201ENST00000362396 134 ntBASIC4.28□□□□□ -1.72
APOEP02649 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.28□□□□□ -1.72
APOEP02649 AC104297.1-201ENST00000393779 870 ntBASIC4.28□□□□□ -1.72
APOEP02649 SNORA81-201ENST00000408493 178 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms