Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL079305.1-201ENST00000623159 3008 ntBASIC4.58□□□□□ -1.68
COL4A1P02462 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.58□□□□□ -1.68
COL4A1P02462 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A1P02462 MAPK10-303ENST00000641324 3959 ntBASIC4.58□□□□□ -1.68
COL4A1P02462 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A1P02462 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
COL4A1P02462 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A1P02462 U3.23-201ENST00000391132 200 ntBASIC4.58□□□□□ -1.68
COL4A1P02462 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.58□□□□□ -1.68
COL4A1P02462 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.58□□□□□ -1.68
COL4A1P02462 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.58□□□□□ -1.68
COL4A1P02462 BX510359.1-201ENST00000456973 237 ntBASIC4.58□□□□□ -1.68
COL4A1P02462 OR4A12P-201ENST00000530847 918 ntBASIC4.58□□□□□ -1.68
COL4A1P02462 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.58□□□□□ -1.68
COL4A1P02462 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.58□□□□□ -1.68
COL4A1P02462 UBE3AP2-201ENST00000429033 2259 ntBASIC4.58□□□□□ -1.68
COL4A1P02462 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
COL4A1P02462 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.58□□□□□ -1.68
COL4A1P02462 Z82217.1-201ENST00000625157 8149 ntBASIC4.58□□□□□ -1.68
COL4A1P02462 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A1P02462 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A1P02462 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A1P02462 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.58□□□□□ -1.68
COL4A1P02462 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A1P02462 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL4A1P02462 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
COL4A1P02462 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
COL4A1P02462 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
COL4A1P02462 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL4A1P02462 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.57□□□□□ -1.68
COL4A1P02462 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
COL4A1P02462 SNORA11.2-201ENST00000408318 127 ntBASIC4.57□□□□□ -1.68
COL4A1P02462 AC017083.1-201ENST00000428093 483 ntBASIC4.57□□□□□ -1.68
COL4A1P02462 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A1P02462 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A1P02462 RPL21P11-201ENST00000461458 483 ntBASIC4.57□□□□□ -1.68
COL4A1P02462 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL4A1P02462 UBA52P3-201ENST00000491303 382 ntBASIC4.57□□□□□ -1.68
COL4A1P02462 AL358832.1-201ENST00000497800 389 ntBASIC4.57□□□□□ -1.68
COL4A1P02462 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A1P02462 AC006960.3-201ENST00000561845 705 ntBASIC4.57□□□□□ -1.68
COL4A1P02462 AL354760.1-201ENST00000608357 643 ntBASIC4.57□□□□□ -1.68
COL4A1P02462 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL4A1P02462 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL4A1P02462 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.57□□□□□ -1.68
COL4A1P02462 DDX18P6-201ENST00000450119 1997 ntBASIC4.57□□□□□ -1.68
COL4A1P02462 AC073346.2-201ENST00000624724 2058 ntBASIC4.57□□□□□ -1.68
COL4A1P02462 AC023632.6-201ENST00000624338 2177 ntBASIC4.57□□□□□ -1.68
COL4A1P02462 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL4A1P02462 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
COL4A1P02462 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL4A1P02462 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL4A1P02462 RNA5SP52-201ENST00000362448 134 ntBASIC4.57□□□□□ -1.68
COL4A1P02462 NDUFB4P4-201ENST00000404822 243 ntBASIC4.57□□□□□ -1.68
COL4A1P02462 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
COL4A1P02462 OSTCP5-201ENST00000425293 453 ntBASIC4.57□□□□□ -1.68
COL4A1P02462 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A1P02462 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A1P02462 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A1P02462 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A1P02462 AP000563.1-201ENST00000490865 758 ntBASIC4.57□□□□□ -1.68
COL4A1P02462 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.57□□□□□ -1.68
COL4A1P02462 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A1P02462 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A1P02462 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.57□□□□□ -1.68
COL4A1P02462 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.57□□□□□ -1.68
COL4A1P02462 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
COL4A1P02462 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A1P02462 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.57□□□□□ -1.68
COL4A1P02462 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL4A1P02462 AC083899.2-201ENST00000423285 1376 ntBASIC4.57□□□□□ -1.68
COL4A1P02462 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A1P02462 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.57□□□□□ -1.68
COL4A1P02462 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.57□□□□□ -1.68
COL4A1P02462 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL4A1P02462 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL4A1P02462 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL4A1P02462 MAPK10-320ENST00000641462 6696 ntBASIC4.56□□□□□ -1.68
COL4A1P02462 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
COL4A1P02462 DDX18P4-201ENST00000511690 1966 ntBASIC4.56□□□□□ -1.68
COL4A1P02462 RNA5SP72-201ENST00000364442 117 ntBASIC4.56□□□□□ -1.68
COL4A1P02462 RNA5SP267-201ENST00000364893 126 ntBASIC4.56□□□□□ -1.68
COL4A1P02462 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL4A1P02462 ZNF602P-201ENST00000405929 924 ntBASIC4.56□□□□□ -1.68
COL4A1P02462 RN7SKP177-201ENST00000410567 355 ntBASIC4.56□□□□□ -1.68
COL4A1P02462 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.56□□□□□ -1.68
COL4A1P02462 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.56□□□□□ -1.68
COL4A1P02462 TMX2P1-201ENST00000436507 708 ntBASIC4.56□□□□□ -1.68
COL4A1P02462 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.56□□□□□ -1.68
COL4A1P02462 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.56□□□□□ -1.68
COL4A1P02462 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.56□□□□□ -1.68
COL4A1P02462 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.56□□□□□ -1.68
COL4A1P02462 CAB39P1-201ENST00000502277 460 ntBASIC4.56□□□□□ -1.68
COL4A1P02462 AC008802.1-201ENST00000519121 791 ntBASIC4.56□□□□□ -1.68
COL4A1P02462 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL4A1P02462 AC037471.2-201ENST00000564941 598 ntBASIC4.56□□□□□ -1.68
COL4A1P02462 AC011471.1-201ENST00000585766 187 ntBASIC4.56□□□□□ -1.68
COL4A1P02462 VN1R92P-201ENST00000598511 928 ntBASIC4.56□□□□□ -1.68
COL4A1P02462 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.56□□□□□ -1.68
COL4A1P02462 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms