Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AP000916.1-201ENST00000533869 835 ntBASIC1.72□□□□□ -2.13
USH2AO75445 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC1.72□□□□□ -2.13
USH2AO75445 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 MAPK10-371ENST00000641952 5209 ntBASIC1.72□□□□□ -2.13
USH2AO75445 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
USH2AO75445 RMST-202ENST00000541282 2099 ntTSL 2 BASIC1.72□□□□□ -2.13
USH2AO75445 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
USH2AO75445 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
USH2AO75445 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 AL359922.3-201ENST00000624779 1670 ntBASIC1.72□□□□□ -2.13
USH2AO75445 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
USH2AO75445 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
USH2AO75445 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 Z74021.1-201ENST00000423610 407 ntBASIC1.72□□□□□ -2.13
USH2AO75445 AC073508.1-201ENST00000428866 656 ntBASIC1.72□□□□□ -2.13
USH2AO75445 AC010342.1-201ENST00000514047 877 ntBASIC1.72□□□□□ -2.13
USH2AO75445 SNORA70.18-201ENST00000516696 98 ntBASIC1.72□□□□□ -2.13
USH2AO75445 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC1.72□□□□□ -2.13
USH2AO75445 AC103843.2-201ENST00000530523 682 ntBASIC1.72□□□□□ -2.13
USH2AO75445 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.72□□□□□ -2.13
USH2AO75445 AC005034.4-201ENST00000603612 899 ntBASIC1.72□□□□□ -2.13
USH2AO75445 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC1.72□□□□□ -2.13
USH2AO75445 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USH2AO75445 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC1.71□□□□□ -2.13
USH2AO75445 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
USH2AO75445 HSPA8P4-201ENST00000511877 1920 ntBASIC1.71□□□□□ -2.13
USH2AO75445 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC1.71□□□□□ -2.13
USH2AO75445 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
USH2AO75445 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
USH2AO75445 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
USH2AO75445 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC1.71□□□□□ -2.14
USH2AO75445 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
USH2AO75445 RPS4XP6-201ENST00000477670 797 ntBASIC1.71□□□□□ -2.14
USH2AO75445 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC1.71□□□□□ -2.14
USH2AO75445 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC1.71□□□□□ -2.14
USH2AO75445 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC1.71□□□□□ -2.14
USH2AO75445 AC027667.1-201ENST00000545814 304 ntBASIC1.71□□□□□ -2.14
USH2AO75445 MIR432-201ENST00000606207 94 ntBASIC1.71□□□□□ -2.14
USH2AO75445 AL157762.1-201ENST00000619612 415 ntBASIC1.71□□□□□ -2.14
USH2AO75445 AC024341.1-201ENST00000526444 1552 ntBASIC1.71□□□□□ -2.14
USH2AO75445 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
USH2AO75445 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
USH2AO75445 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC1.71□□□□□ -2.14
USH2AO75445 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
USH2AO75445 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
USH2AO75445 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
USH2AO75445 AC090337.1-201ENST00000579651 2074 ntBASIC1.71□□□□□ -2.14
USH2AO75445 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.71□□□□□ -2.14
USH2AO75445 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC1.71□□□□□ -2.14
USH2AO75445 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.71□□□□□ -2.14
USH2AO75445 RNA5SP303-201ENST00000516192 130 ntBASIC1.71□□□□□ -2.14
USH2AO75445 NRBF2P5-201ENST00000603087 788 ntBASIC1.71□□□□□ -2.14
USH2AO75445 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC1.71□□□□□ -2.14
USH2AO75445 OFD1P6Y-202ENST00000451061 2724 ntBASIC1.71□□□□□ -2.14
USH2AO75445 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
USH2AO75445 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
USH2AO75445 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
USH2AO75445 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
USH2AO75445 CASC19-206ENST00000641028 1430 ntBASIC1.71□□□□□ -2.14
USH2AO75445 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC1.71□□□□□ -2.14
USH2AO75445 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC1.71□□□□□ -2.14
USH2AO75445 AL451142.2-201ENST00000429076 2090 ntBASIC1.71□□□□□ -2.14
USH2AO75445 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
USH2AO75445 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
USH2AO75445 OSTCP5-201ENST00000425293 453 ntBASIC1.71□□□□□ -2.14
USH2AO75445 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.71□□□□□ -2.14
USH2AO75445 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC1.71□□□□□ -2.14
USH2AO75445 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC1.71□□□□□ -2.14
USH2AO75445 PDLIM1P4-201ENST00000504327 1006 ntBASIC1.71□□□□□ -2.14
USH2AO75445 EIF4A2P3-201ENST00000525903 1055 ntBASIC1.71□□□□□ -2.14
USH2AO75445 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.71□□□□□ -2.14
USH2AO75445 AC006539.2-201ENST00000601729 572 ntBASIC1.71□□□□□ -2.14
USH2AO75445 AC010591.1-201ENST00000603941 649 ntBASIC1.71□□□□□ -2.14
USH2AO75445 Xist_exon4.1-201ENST00000615964 126 ntBASIC1.71□□□□□ -2.14
USH2AO75445 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC1.71□□□□□ -2.14
USH2AO75445 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC1.71□□□□□ -2.14
USH2AO75445 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC1.71□□□□□ -2.14
USH2AO75445 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC1.71□□□□□ -2.14
USH2AO75445 AC005831.1-201ENST00000624384 1697 ntBASIC1.71□□□□□ -2.14
USH2AO75445 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
USH2AO75445 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
USH2AO75445 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
USH2AO75445 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
USH2AO75445 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
USH2AO75445 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
USH2AO75445 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
USH2AO75445 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
USH2AO75445 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
USH2AO75445 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
USH2AO75445 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC1.71□□□□□ -2.14
USH2AO75445 RPL7P12-201ENST00000446719 750 ntBASIC1.71□□□□□ -2.14
USH2AO75445 NPM1P39-201ENST00000449818 867 ntBASIC1.71□□□□□ -2.14
USH2AO75445 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.71□□□□□ -2.14
USH2AO75445 AC092747.2-201ENST00000545069 983 ntBASIC1.71□□□□□ -2.14
USH2AO75445 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC1.71□□□□□ -2.14
USH2AO75445 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms