Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 OR6K4P-201ENST00000423179 955 ntBASIC4.3□□□□□ -1.72
PRKNO60260 RPEP3-201ENST00000425462 676 ntBASIC4.3□□□□□ -1.72
PRKNO60260 RPL12P28-201ENST00000430852 489 ntBASIC4.3□□□□□ -1.72
PRKNO60260 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.3□□□□□ -1.72
PRKNO60260 PTGES3P1-201ENST00000439531 483 ntBASIC4.3□□□□□ -1.72
PRKNO60260 CR769776.1-201ENST00000441254 787 ntBASIC4.3□□□□□ -1.72
PRKNO60260 AL353093.1-201ENST00000441292 436 ntBASIC4.3□□□□□ -1.72
PRKNO60260 GTF3AP5-201ENST00000442645 697 ntBASIC4.3□□□□□ -1.72
PRKNO60260 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.3□□□□□ -1.72
PRKNO60260 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.3□□□□□ -1.72
PRKNO60260 Z73417.1-201ENST00000447373 778 ntBASIC4.3□□□□□ -1.72
PRKNO60260 ZNF886P-201ENST00000450781 723 ntBASIC4.3□□□□□ -1.72
PRKNO60260 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.3□□□□□ -1.72
PRKNO60260 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.3□□□□□ -1.72
PRKNO60260 AC244505.3-201ENST00000454598 187 ntBASIC4.3□□□□□ -1.72
PRKNO60260 AC037198.2-201ENST00000478845 733 ntBASIC4.3□□□□□ -1.72
PRKNO60260 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.3□□□□□ -1.72
PRKNO60260 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.3□□□□□ -1.72
PRKNO60260 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.3□□□□□ -1.72
PRKNO60260 AC007016.1-201ENST00000512110 244 ntBASIC4.3□□□□□ -1.72
PRKNO60260 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.3□□□□□ -1.72
PRKNO60260 AP001781.1-201ENST00000530977 207 ntBASIC4.3□□□□□ -1.72
PRKNO60260 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.3□□□□□ -1.72
PRKNO60260 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.3□□□□□ -1.72
PRKNO60260 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.3□□□□□ -1.72
PRKNO60260 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.3□□□□□ -1.72
PRKNO60260 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.3□□□□□ -1.72
PRKNO60260 AC013468.1-201ENST00000608680 598 ntBASIC4.3□□□□□ -1.72
PRKNO60260 FRG1HP-204ENST00000617940 757 ntBASIC4.3□□□□□ -1.72
PRKNO60260 AC123767.1-202ENST00000620407 817 ntBASIC4.3□□□□□ -1.72
PRKNO60260 AC145207.9-201ENST00000623802 325 ntBASIC4.3□□□□□ -1.72
PRKNO60260 AC068057.2-201ENST00000624047 895 ntBASIC4.3□□□□□ -1.72
PRKNO60260 AC019226.2-201ENST00000625973 424 ntBASIC4.3□□□□□ -1.72
PRKNO60260 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.3□□□□□ -1.72
PRKNO60260 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.3□□□□□ -1.72
PRKNO60260 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.3□□□□□ -1.72
PRKNO60260 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRKNO60260 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PRKNO60260 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRKNO60260 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRKNO60260 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PRKNO60260 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PRKNO60260 PCAT14-202ENST00000627127 3935 ntBASIC4.29□□□□□ -1.72
PRKNO60260 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.29□□□□□ -1.72
PRKNO60260 AC005332.5-201ENST00000591222 2919 ntBASIC4.29□□□□□ -1.72
PRKNO60260 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PRKNO60260 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRKNO60260 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRKNO60260 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
PRKNO60260 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRKNO60260 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRKNO60260 METTL21EP-201ENST00000298105 713 ntBASIC4.29□□□□□ -1.72
PRKNO60260 OR4K15-201ENST00000305051 1216 ntBASIC4.29□□□□□ -1.72
PRKNO60260 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRKNO60260 RNU6-236P-201ENST00000363886 106 ntBASIC4.29□□□□□ -1.72
PRKNO60260 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.29□□□□□ -1.72
PRKNO60260 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
PRKNO60260 MIR513B-201ENST00000385136 84 ntBASIC4.29□□□□□ -1.72
PRKNO60260 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRKNO60260 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PRKNO60260 AP000357.1-201ENST00000409926 1165 ntBASIC4.29□□□□□ -1.72
PRKNO60260 RNA5SP498-201ENST00000411342 120 ntBASIC4.29□□□□□ -1.72
PRKNO60260 MTCO2P21-201ENST00000419780 677 ntBASIC4.29□□□□□ -1.72
PRKNO60260 AC245028.1-201ENST00000423259 256 ntBASIC4.29□□□□□ -1.72
PRKNO60260 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.29□□□□□ -1.72
PRKNO60260 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.29□□□□□ -1.72
PRKNO60260 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.29□□□□□ -1.72
PRKNO60260 H2AFZP6-201ENST00000444403 394 ntBASIC4.29□□□□□ -1.72
PRKNO60260 ARL2BPP10-201ENST00000446487 531 ntBASIC4.29□□□□□ -1.72
PRKNO60260 AL591623.2-201ENST00000449978 222 ntBASIC4.29□□□□□ -1.72
PRKNO60260 AL591363.1-201ENST00000450091 483 ntBASIC4.29□□□□□ -1.72
PRKNO60260 AC006463.2-201ENST00000473326 348 ntBASIC4.29□□□□□ -1.72
PRKNO60260 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.29□□□□□ -1.72
PRKNO60260 AC104763.1-201ENST00000475274 360 ntBASIC4.29□□□□□ -1.72
PRKNO60260 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.29□□□□□ -1.72
PRKNO60260 AC025164.1-201ENST00000496249 478 ntBASIC4.29□□□□□ -1.72
PRKNO60260 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.29□□□□□ -1.72
PRKNO60260 RN7SKP92-201ENST00000517266 244 ntBASIC4.29□□□□□ -1.72
PRKNO60260 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.29□□□□□ -1.72
PRKNO60260 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.29□□□□□ -1.72
PRKNO60260 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.29□□□□□ -1.72
PRKNO60260 ATP5F1P7-201ENST00000567330 760 ntBASIC4.29□□□□□ -1.72
PRKNO60260 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.29□□□□□ -1.72
PRKNO60260 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.29□□□□□ -1.72
PRKNO60260 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.29□□□□□ -1.72
PRKNO60260 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PRKNO60260 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.29□□□□□ -1.72
PRKNO60260 NIFKP6-201ENST00000598115 845 ntBASIC4.29□□□□□ -1.72
PRKNO60260 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRKNO60260 BNIP3P41-202ENST00000616656 861 ntBASIC4.29□□□□□ -1.72
PRKNO60260 AP002791.1-201ENST00000623291 381 ntBASIC4.29□□□□□ -1.72
PRKNO60260 AC138907.10-201ENST00000623708 983 ntBASIC4.29□□□□□ -1.72
PRKNO60260 AC120349.3-201ENST00000624377 529 ntBASIC4.29□□□□□ -1.72
PRKNO60260 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.29□□□□□ -1.72
PRKNO60260 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PRKNO60260 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PRKNO60260 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PRKNO60260 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
PRKNO60260 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.29□□□□□ -1.72
PRKNO60260 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms